Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 OR11H3P-201ENST00000554547 982 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 GLRXP2-201ENST00000555594 321 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 MIR548Y-201ENST00000582739 110 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AL022394.1-201ENST00000606979 292 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC004477.3-201ENST00000614061 590 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC022306.3-201ENST00000619930 550 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC010872.1-201ENST00000624225 675 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC007683.2-201ENST00000624681 714 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC083865.1-201ENST00000636634 831 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC008691.1-209ENST00000642094 814 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 HSPD1P11-201ENST00000508643 1702 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC144833.1-201ENST00000567953 4089 ntBASIC5.3□□□□□ -1.56
BRF2Q9HAW0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.3□□□□□ -1.56
BRF2Q9HAW0 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 OR4K17-201ENST00000315543 1032 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 MIR142-201ENST00000384835 87 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 RNU6-796P-201ENST00000391086 107 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 RPSAP35-201ENST00000413753 818 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC093155.2-201ENST00000420734 937 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 RPL34P3-201ENST00000421454 338 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AL136231.1-201ENST00000429407 730 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 NPM1P39-201ENST00000449818 867 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 RPL21P47-201ENST00000483696 477 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PFN1P8-201ENST00000497012 543 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC006499.4-201ENST00000510947 694 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 SNORA43.3-201ENST00000517240 103 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 NRBF2P4-201ENST00000520874 850 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 BNIP3P39-201ENST00000601077 554 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AP003476.1-201ENST00000623984 516 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 MIR193BHG-214ENST00000641765 509 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 ABCC13-202ENST00000463099 3842 ntBASIC5.29□□□□□ -1.56
BRF2Q9HAW0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.29□□□□□ -1.56
BRF2Q9HAW0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms