Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 HMGB1P4-201ENST00000455362 567 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 BX284632.1-201ENST00000478218 541 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC004815.1-201ENST00000484185 331 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC012339.2-201ENST00000523996 453 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 OR10G5P-201ENST00000532733 358 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AGGF1P9-201ENST00000561884 913 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC007448.1-201ENST00000582714 234 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC006363.1-201ENST00000603806 463 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 TAS2R6P-201ENST00000605022 826 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AC063976.2-201ENST00000425667 3556 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 NXF4-202ENST00000416098 1465 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AC098592.2-201ENST00000413158 265 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 LYPLA1P1-201ENST00000434514 622 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 COX6B1P2-201ENST00000489624 230 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 MORF4L2P1-201ENST00000503761 858 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AL121612.2-201ENST00000612261 482 ntBASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCSER1Q9C0I3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 SNURFL-201ENST00000309296 343 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 MIR765-201ENST00000390226 114 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 RPL23AP27-201ENST00000415161 451 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 RPL12P43-201ENST00000420608 499 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 RPL34P20-201ENST00000442771 351 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 TCEA1P1-201ENST00000449716 880 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 IGHV5-78-201ENST00000450948 295 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AURKAPS1-201ENST00000451805 1212 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AL691482.1-201ENST00000453255 87 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AL356981.1-201ENST00000454879 684 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 RN7SL515P-201ENST00000463999 297 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC010350.1-201ENST00000504908 231 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 RN7SKP260-201ENST00000516907 149 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AP006245.2-201ENST00000522004 300 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC115989.2-201ENST00000578640 563 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC105254.2-201ENST00000603636 436 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 SNORA35B-201ENST00000607417 129 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 AC087821.1-201ENST00000623639 567 ntBASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.65□□□□□ -1.5
CCSER1Q9C0I3 THAP12P4-201ENST00000528321 2266 ntBASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms