Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AL158152.1-201ENST00000602652 1435 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC104966.1-201ENST00000467010 1464 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 U3.7-201ENST00000363668 216 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 RNU4-68P-201ENST00000364314 141 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 RNA5SP211-201ENST00000365516 117 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 RNU6-1242P-201ENST00000391052 103 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 CHMP1B2P-201ENST00000399581 597 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC119751.3-201ENST00000399720 670 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 RPL7P27-201ENST00000403775 720 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 HMGB1P13-201ENST00000406019 642 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 NACAP7-201ENST00000407371 609 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AL096829.1-201ENST00000413677 457 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AL035422.1-201ENST00000414193 397 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC130360.1-201ENST00000425489 1117 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AL035458.1-201ENST00000433096 585 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC002553.3-201ENST00000453002 341 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC016724.1-201ENST00000453215 421 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 SDC4P-201ENST00000453285 601 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC130365.2-201ENST00000525882 1201 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC027026.1-201ENST00000532323 742 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AL121594.2-201ENST00000541658 472 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC011611.5-201ENST00000552477 578 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 MTND4P33-201ENST00000556706 766 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC007346.2-201ENST00000564816 892 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC090826.1-203ENST00000569235 490 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AP005136.2-201ENST00000583253 1049 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC069304.3-201ENST00000603938 1084 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AL022161.1-201ENST00000604390 213 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC012557.1-201ENST00000607115 611 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 RNU6-84P-201ENST00000607737 102 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC015982.1-201ENST00000608113 465 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AL080312.2-201ENST00000613001 630 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC090897.3-201ENST00000636973 1157 ntBASIC5.37□□□□□ -1.55
SNX18Q96RF0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.37□□□□□ -1.55
SNX18Q96RF0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX18Q96RF0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 OR10R3P-201ENST00000361688 942 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 SNORA21-201ENST00000362423 132 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 SNORD116-8-201ENST00000384365 95 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms