Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC009238.2-201ENST00000431026 355 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC245047.2-201ENST00000441060 530 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC079841.1-201ENST00000481228 950 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 OR2A3P-201ENST00000493774 953 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNA5SP34-201ENST00000516887 130 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC105031.1-201ENST00000518550 476 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC108359.1-201ENST00000616451 1211 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 CR788268.1-201ENST00000603931 1809 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RARSP1-201ENST00000542842 1418 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL21A1Q96P44 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL21A1Q96P44 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 SOCS5P3-201ENST00000425115 1576 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC013442.1-201ENST00000397347 228 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 NUDT19P3-201ENST00000404698 555 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 RN7SKP126-201ENST00000411143 300 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 RPS4XP16-201ENST00000427198 791 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 CNOT7P2-201ENST00000441051 832 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 AL031584.1-201ENST00000447169 754 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC091180.1-201ENST00000462104 372 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 RN7SL591P-201ENST00000496150 292 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC097173.1-201ENST00000505862 819 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 RNA5SP303-201ENST00000516192 130 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC134349.2-201ENST00000535136 910 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AL390726.5-202ENST00000564800 256 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AC018695.5-201ENST00000605872 315 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 AL590763.1-201ENST00000398297 1545 ntBASIC4.8□□□□□ -1.64
COL21A1Q96P44 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.8□□□□□ -1.64
COL21A1Q96P44 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL21A1Q96P44 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL21A1Q96P44 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC112255.1-201ENST00000624070 2493 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AL139148.1-201ENST00000427122 680 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AL163193.1-201ENST00000444895 788 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 SUMO2P1-206ENST00000445436 284 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms