Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 RN7SKP95-201ENST00000362860 303 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 RNA5SP123-201ENST00000363244 119 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 Z97832.1-201ENST00000402490 328 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC004980.3-201ENST00000447046 365 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 RPS4XP12-201ENST00000461747 709 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC091180.1-201ENST00000462104 372 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC017007.3-201ENST00000479865 435 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AL049874.2-201ENST00000492636 288 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 RFPL4AP3-201ENST00000515267 345 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 KCTD9P6-201ENST00000522306 950 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC012339.2-201ENST00000523996 453 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AL390334.1-201ENST00000556395 450 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 EIF3FP1-201ENST00000613970 806 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC073575.2-201ENST00000614212 627 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC090510.2-201ENST00000617465 629 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AC091905.4-201ENST00000623432 202 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 INTS6P1-201ENST00000504674 2530 ntBASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ECHDC3Q96DC8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AC112255.1-201ENST00000624070 2493 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 MIPEPP2-201ENST00000422560 1819 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AL645733.1-201ENST00000402250 217 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 SNORA81-201ENST00000408493 178 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 RN7SKP16-201ENST00000410180 299 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 RN7SKP125-201ENST00000410481 302 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 PCNPP4-201ENST00000414817 517 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AL450023.3-201ENST00000440592 271 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 HMGB1P4-201ENST00000455362 567 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AC008126.1-201ENST00000549019 480 ntBASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
ECHDC3Q96DC8 NAMPTP1-201ENST00000440465 2514 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 SOCS5P3-201ENST00000425115 1576 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AP002530.1-201ENST00000405705 684 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 RNA5SP296-201ENST00000410523 111 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms