Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC007954.1-201ENST00000554198 494 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC090515.3-201ENST00000560431 315 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC139493.1-201ENST00000604368 397 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC116312.1-201ENST00000606841 314 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AL050343.2-201ENST00000607338 280 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC019193.2-201ENST00000610012 634 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 uc_338.31-201ENST00000615595 186 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 MIR6721-201ENST00000617181 87 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC073569.3-201ENST00000619055 682 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC012414.7-202ENST00000622705 1090 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC135068.5-201ENST00000624197 983 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 OR1S1-201ENST00000624470 978 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 TMCC1P1-201ENST00000518897 1980 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 Y_RNA.453-201ENST00000384223 109 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 RNY3P10-201ENST00000384764 102 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 PMS2P9-201ENST00000441237 515 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 SSXP1-201ENST00000453640 473 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC118758.1-202ENST00000454719 225 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 MTND6P6-201ENST00000478031 263 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 HPRT1P2-201ENST00000505250 544 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC113367.2-201ENST00000505749 160 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 MTCYBP43-201ENST00000513621 740 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 Y_RNA.675-201ENST00000516389 149 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AL078601.3-201ENST00000573303 535 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 MIR4795-201ENST00000584182 89 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AP001429.1-201ENST00000602568 530 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AL135999.3-201ENST00000610501 812 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 MIR7109-201ENST00000613748 65 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC009033.1-201ENST00000624279 431 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC011455.2-201ENST00000599320 3336 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 SPATA31C1-201ENST00000420021 3895 ntBASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEDD1Q8NHV4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MT-RNR2-201ENST00000387347 1559 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 RNU6-500P-201ENST00000362349 107 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 RNA5SP188-201ENST00000362916 129 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 RNA5SP279-201ENST00000365513 117 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 U6.112-201ENST00000384129 70 ntBASIC7.55□□□□□ -1.2
NEDD1Q8NHV4 MIR188-201ENST00000385034 86 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms