Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL050335.1-201ENST00000396909 869 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL445238.1-204ENST00000400311 463 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC245884.2-201ENST00000426257 404 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 NANOGP4-201ENST00000427230 913 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AP001324.1-201ENST00000428553 399 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL121776.1-201ENST00000429337 372 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 RPS24P8-201ENST00000431490 402 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 KATNBL1P3-201ENST00000443475 909 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AP006222.1-205ENST00000450734 457 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC023141.9-201ENST00000458734 412 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL136038.1-201ENST00000497246 351 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 DYNLL1P6-201ENST00000503440 264 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC026782.2-201ENST00000510845 636 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 MRPS33P3-201ENST00000513456 322 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 IGKV2-36-201ENST00000519999 223 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 NBEAP1-201ENST00000554452 979 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC007225.2-201ENST00000562529 256 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL021707.7-201ENST00000607991 416 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC022467.1-201ENST00000614738 749 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC090246.1-201ENST00000616499 426 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL022323.4-201ENST00000623980 13120 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL133243.2-201ENST00000610331 1621 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AL513185.3-201ENST00000433335 1300 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 DCAF13P3-201ENST00000561147 1334 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 BIN2P1-201ENST00000504996 1530 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AL359976.1-201ENST00000418655 3528 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 Y_RNA.192-201ENST00000363977 102 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 MIR1203-201ENST00000408812 85 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 MFSD13B-201ENST00000420133 1290 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AL365396.1-201ENST00000430854 671 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 TUBB4BP6-201ENST00000437576 479 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AP000936.3-201ENST00000438127 255 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 RPL23AP76-201ENST00000441860 458 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC079776.3-201ENST00000450665 370 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC022431.1-201ENST00000450941 438 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC234781.3-201ENST00000452540 973 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 SEPT7P3-201ENST00000455017 621 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 HMGB1P4-201ENST00000455362 567 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 PRDX3P4-201ENST00000470828 747 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 RN7SL193P-201ENST00000491708 276 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AC138832.1-201ENST00000522871 556 ntBASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNPOQ8N3V7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms