Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL499605.1-201ENST00000604628 403 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC009974.1-201ENST00000608881 455 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC106872.5-201ENST00000508856 1416 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 OOSP1-201ENST00000398992 1270 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 VN1R12P-201ENST00000403778 876 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 NACAP7-201ENST00000407371 609 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 RN7SKP240-201ENST00000410583 375 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 ARL2BPP3-201ENST00000421226 480 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AL662874.1-201ENST00000426065 230 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC005297.1-201ENST00000444765 862 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 MTCYBP11-201ENST00000447254 1109 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 RPL32P14-201ENST00000463196 378 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC104164.3-201ENST00000467363 1258 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 RN7SL741P-201ENST00000482473 289 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC015864.1-201ENST00000496512 544 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 SNORA43.3-201ENST00000517240 103 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 MTND2P38-201ENST00000522536 667 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC005363.1-201ENST00000530779 351 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC107958.1-201ENST00000556576 290 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC090666.1-201ENST00000578241 445 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC004223.2-201ENST00000590309 544 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AL139407.1-201ENST00000613826 1175 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC084824.4-201ENST00000620106 731 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC007275.1-201ENST00000621243 671 ntBASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP4Q8N3C7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.6
CLIP4Q8N3C7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLIP4Q8N3C7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CLIP4Q8N3C7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CLIP4Q8N3C7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.09□□□□□ -1.6
CLIP4Q8N3C7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC091305.2-201ENST00000624049 1576 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AL078621.3-201ENST00000623707 2042 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 Z95331.1-201ENST00000623075 23112 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 PPIAP9-201ENST00000403866 498 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 RPS3AP2-201ENST00000407190 754 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC099535.1-201ENST00000408928 371 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 VN1R51P-201ENST00000411675 945 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 RAB28P3-201ENST00000448325 597 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 NPM1P29-201ENST00000483112 803 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 RN7SL423P-201ENST00000486202 304 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC021146.5-201ENST00000503544 545 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP4Q8N3C7 AC008147.3-201ENST00000548666 354 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms