Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 AC009027.1-201ENST00000604510 479 ntBASIC4.34□□□□□ -1.71
LRRK2Q5S007 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.34□□□□□ -1.71
LRRK2Q5S007 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.34□□□□□ -1.71
LRRK2Q5S007 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRK2Q5S007 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRK2Q5S007 SNORD8-201ENST00000363915 110 ntBASIC4.34□□□□□ -1.72
LRRK2Q5S007 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.34□□□□□ -1.72
LRRK2Q5S007 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRK2Q5S007 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.34□□□□□ -1.72
LRRK2Q5S007 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.34□□□□□ -1.72
LRRK2Q5S007 AP003400.2-201ENST00000624036 666 ntBASIC4.34□□□□□ -1.72
LRRK2Q5S007 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRK2Q5S007 AL031651.1-201ENST00000615357 1438 ntBASIC4.34□□□□□ -1.72
LRRK2Q5S007 AL365361.1-201ENST00000566942 3481 ntBASIC4.34□□□□□ -1.72
LRRK2Q5S007 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.34□□□□□ -1.72
LRRK2Q5S007 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRK2Q5S007 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRK2Q5S007 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 SAMMSON-210ENST00000641260 1308 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC063976.2-201ENST00000425667 3556 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 RPL11P3-201ENST00000395256 523 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 AL645608.4-201ENST00000423619 154 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 RPS12P10-201ENST00000427031 377 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 RPL23AP93-201ENST00000440847 484 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC104971.1-201ENST00000495117 578 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 MIR6853-201ENST00000619642 74 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 TTC41P-205ENST00000551270 3963 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 UGT2B26P-201ENST00000508672 1613 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 RNA5SP372-201ENST00000390836 115 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 NRBF2P3-201ENST00000432731 865 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 TCEA1P1-201ENST00000449716 880 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 RPL12P39-201ENST00000455456 496 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC091564.1-201ENST00000464563 479 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 RPS12P31-201ENST00000491419 398 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 RN7SL176P-201ENST00000580352 264 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC067852.5-201ENST00000589299 310 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 AL133481.2-203ENST00000607558 139 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AC114781.5-201ENST00000615297 108 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 AL450472.3-201ENST00000615578 367 ntBASIC4.33□□□□□ -1.72
LRRK2Q5S007 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
LRRK2Q5S007 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRK2Q5S007 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 AL607077.1-201ENST00000401718 499 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC233289.1-201ENST00000403700 508 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 RN7SL303P-201ENST00000469773 251 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AL133372.1-201ENST00000493565 745 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 snoU109.5-201ENST00000516231 132 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms