Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC138907.8-201ENST00000623981 2256 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 RN7SKP286-201ENST00000410894 299 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 HMGB1P49-201ENST00000418882 569 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL365220.1-201ENST00000432923 399 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL445466.1-201ENST00000448432 357 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 MTND1P31-201ENST00000449206 961 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 RANP1-206ENST00000455094 651 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC073594.1-201ENST00000462065 364 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 TRBV8-2-201ENST00000475637 270 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 RPS4XP14-201ENST00000493072 781 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC112673.1-201ENST00000513168 575 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC018442.3-201ENST00000523025 183 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC139103.1-201ENST00000534696 1030 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC090022.1-201ENST00000546569 311 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 NPM1P47-201ENST00000560843 856 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AP001542.2-201ENST00000593141 364 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 VN1R84P-201ENST00000593697 235 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 COX6CP7-201ENST00000597056 208 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC004908.3-201ENST00000610248 625 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 RNA5SP440-201ENST00000612665 119 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC079395.3-201ENST00000615161 484 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL121895.2-201ENST00000619558 447 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AP002782.1-201ENST00000623107 614 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL357562.1-201ENST00000624911 609 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC000095.2-202ENST00000637415 154 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AL049767.1-202ENST00000637826 242 ntBASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC144BQ3MJ40 AC111188.2-201ENST00000529697 1387 ntBASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 AC106872.5-201ENST00000508856 1416 ntBASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 MTCO1P7-201ENST00000419523 1542 ntBASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC144BQ3MJ40 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 CASC19-260ENST00000641828 2001 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 OR52E6-202ENST00000379946 954 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 RNU6-636P-201ENST00000384598 107 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 U3.25-201ENST00000391209 220 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 MTND2P16-201ENST00000419987 799 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 OR2X1P-201ENST00000421144 687 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 OR5M12P-201ENST00000423388 929 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AP001324.1-201ENST00000428553 399 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 LYPLA1P1-201ENST00000434514 622 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms