Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
PCDH1Q08174 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDH1Q08174 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDH1Q08174 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDH1Q08174 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDH1Q08174 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDH1Q08174 AC131971.1-201ENST00000332881 1482 ntBASIC6.65□□□□□ -1.35
PCDH1Q08174 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
PCDH1Q08174 Z97989.1-201ENST00000531702 2421 ntBASIC6.65□□□□□ -1.35
PCDH1Q08174 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.65□□□□□ -1.35
PCDH1Q08174 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.65□□□□□ -1.35
PCDH1Q08174 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 Y_RNA.38-201ENST00000362617 102 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 RNU6-666P-201ENST00000363499 107 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 MT-TL1-201ENST00000386347 75 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AL121878.1-201ENST00000418638 859 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 SKP1P3-201ENST00000429280 487 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AL831737.1-201ENST00000441288 271 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 DPPA3P1-201ENST00000448050 469 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 DNAJB5P1-201ENST00000454004 806 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 LARP1BP2-201ENST00000486594 519 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 HMGN2P25-201ENST00000486956 268 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC018639.1-201ENST00000492994 442 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 MTCO2P30-201ENST00000503662 364 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC025465.4-201ENST00000513422 638 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 RNA5SP278-201ENST00000517055 102 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 IGLC4-201ENST00000517690 248 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AC239860.2-201ENST00000525886 270 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AP002748.2-201ENST00000528671 348 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH1Q08174 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 FXYD6P1-201ENST00000604857 285 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AC005332.6-201ENST00000613178 446 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC025287.2-201ENST00000621911 668 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AP000577.1-201ENST00000624366 878 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AL359697.1-201ENST00000624879 587 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC026108.1-201ENST00000635444 547 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC096992.2-201ENST00000609553 1684 ntBASIC6.64□□□□□ -1.35
PCDH1Q08174 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH1Q08174 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDH1Q08174 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PCDH1Q08174 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH1Q08174 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 RNU6-433P-201ENST00000363216 104 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RNU6-619P-201ENST00000365146 108 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms