Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CCL20P78556 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCL20P78556 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL20P78556 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.82□□□□□ -1.8
CCL20P78556 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL20P78556 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CCL20P78556 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 AL353625.1-202ENST00000366273 571 ntBASIC3.82□□□□□ -1.8
CCL20P78556 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCL20P78556 ATP5HP3-201ENST00000396994 486 ntBASIC3.82□□□□□ -1.8
CCL20P78556 RN7SKP247-201ENST00000411094 308 ntBASIC3.82□□□□□ -1.8
CCL20P78556 VDAC1P9-201ENST00000412766 841 ntBASIC3.82□□□□□ -1.8
CCL20P78556 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 AL139158.1-201ENST00000424719 340 ntBASIC3.82□□□□□ -1.8
CCL20P78556 RPS29P9-201ENST00000440360 171 ntBASIC3.82□□□□□ -1.8
CCL20P78556 AC064862.5-201ENST00000440618 334 ntBASIC3.82□□□□□ -1.8
CCL20P78556 RPL12P49-201ENST00000441100 121 ntBASIC3.82□□□□□ -1.8
CCL20P78556 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 OR2A3P-201ENST00000493774 953 ntBASIC3.82□□□□□ -1.8
CCL20P78556 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 AC025458.1-201ENST00000506046 166 ntBASIC3.82□□□□□ -1.8
CCL20P78556 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 AC116917.1-201ENST00000520558 305 ntBASIC3.82□□□□□ -1.8
CCL20P78556 HMGB1P40-201ENST00000525121 540 ntBASIC3.82□□□□□ -1.8
CCL20P78556 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.82□□□□□ -1.8
CCL20P78556 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCL20P78556 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.82□□□□□ -1.8
CCL20P78556 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 AC018552.1-201ENST00000562099 811 ntBASIC3.82□□□□□ -1.8
CCL20P78556 RPL10P14-201ENST00000565265 298 ntBASIC3.82□□□□□ -1.8
CCL20P78556 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.82□□□□□ -1.8
CCL20P78556 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.82□□□□□ -1.8
CCL20P78556 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL20P78556 AL049794.2-201ENST00000616301 365 ntBASIC3.82□□□□□ -1.8
CCL20P78556 AL158196.1-201ENST00000616786 434 ntBASIC3.82□□□□□ -1.8
CCL20P78556 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL20P78556 AC111152.1-202ENST00000635848 339 ntBASIC3.82□□□□□ -1.8
CCL20P78556 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCL20P78556 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL20P78556 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCL20P78556 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.81□□□□□ -1.8
CCL20P78556 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.81□□□□□ -1.8
CCL20P78556 CR382285.2-201ENST00000624662 1495 ntBASIC3.81□□□□□ -1.8
CCL20P78556 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.81□□□□□ -1.8
CCL20P78556 MTND4P26-201ENST00000415971 1359 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AC016588.2-201ENST00000632484 3021 ntBASIC3.81□□□□□ -1.8
CCL20P78556 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.81□□□□□ -1.8
CCL20P78556 MIR551B-201ENST00000384984 96 ntBASIC3.81□□□□□ -1.8
CCL20P78556 MIR1182-201ENST00000408363 97 ntBASIC3.81□□□□□ -1.8
CCL20P78556 GSTM3P2-201ENST00000412746 530 ntBASIC3.81□□□□□ -1.8
CCL20P78556 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.81□□□□□ -1.8
CCL20P78556 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.81□□□□□ -1.8
CCL20P78556 DSTNP5-201ENST00000427921 523 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.81□□□□□ -1.8
CCL20P78556 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 NPM1P48-201ENST00000436002 853 ntBASIC3.81□□□□□ -1.8
CCL20P78556 Z84478.1-201ENST00000438230 1219 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.81□□□□□ -1.8
CCL20P78556 EEF1B2P6-201ENST00000445713 673 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AP006222.1-205ENST00000450734 457 ntBASIC3.81□□□□□ -1.8
CCL20P78556 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 RPL29P23-201ENST00000486188 442 ntBASIC3.81□□□□□ -1.8
CCL20P78556 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.81□□□□□ -1.8
CCL20P78556 OR51K1P-201ENST00000510214 950 ntBASIC3.81□□□□□ -1.8
CCL20P78556 RPS27AP18-201ENST00000515536 459 ntBASIC3.81□□□□□ -1.8
CCL20P78556 OR4A41P-201ENST00000533053 928 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.81□□□□□ -1.8
CCL20P78556 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.81□□□□□ -1.8
CCL20P78556 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.81□□□□□ -1.8
CCL20P78556 AC092121.1-201ENST00000569452 202 ntBASIC3.81□□□□□ -1.8
CCL20P78556 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCL20P78556 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.81□□□□□ -1.8
CCL20P78556 AC005377.1-201ENST00000605126 456 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AL359757.1-201ENST00000623176 255 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AC006453.5-201ENST00000636451 619 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AC074101.1-201ENST00000637861 241 ntBASIC3.81□□□□□ -1.8
CCL20P78556 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.81□□□□□ -1.8
CCL20P78556 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms