Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.33□□□□□ -1.56
RAE1P78406 TRY2P-201ENST00000448860 689 ntBASIC5.33□□□□□ -1.56
RAE1P78406 ZNF886P-201ENST00000450781 723 ntBASIC5.33□□□□□ -1.56
RAE1P78406 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.33□□□□□ -1.56
RAE1P78406 HSPE1P22-201ENST00000456856 327 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 AC011476.1-201ENST00000466725 307 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 AC021106.1-201ENST00000509020 1058 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 OR8I1P-201ENST00000529291 931 ntBASIC5.33□□□□□ -1.56
RAE1P78406 TRIM51DP-201ENST00000529746 596 ntBASIC5.33□□□□□ -1.56
RAE1P78406 OR5AM1P-201ENST00000532136 1032 ntBASIC5.33□□□□□ -1.56
RAE1P78406 LRRC6P1-201ENST00000532188 885 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 NANOGNBP2-201ENST00000544753 553 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.33□□□□□ -1.56
RAE1P78406 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 AC005412.1-201ENST00000580812 1049 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 CCDC58P3-201ENST00000590792 430 ntBASIC5.33□□□□□ -1.56
RAE1P78406 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 GAS5-AS1-201ENST00000602767 694 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 AC007786.3-201ENST00000615154 596 ntBASIC5.33□□□□□ -1.56
RAE1P78406 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RAE1P78406 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.33□□□□□ -1.56
RAE1P78406 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RAE1P78406 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 AC003973.3-201ENST00000624863 2822 ntBASIC5.33□□□□□ -1.56
RAE1P78406 DNM1P47-203ENST00000571780 12667 ntBASIC5.33□□□□□ -1.56
RAE1P78406 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.32□□□□□ -1.56
RAE1P78406 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 RNU4-28P-201ENST00000364739 141 ntBASIC5.32□□□□□ -1.56
RAE1P78406 RNU4-7P-201ENST00000364758 141 ntBASIC5.32□□□□□ -1.56
RAE1P78406 RNA5SP131-201ENST00000365452 119 ntBASIC5.32□□□□□ -1.56
RAE1P78406 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RAE1P78406 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RAE1P78406 U3.28-201ENST00000391249 210 ntBASIC5.32□□□□□ -1.56
RAE1P78406 HMGB1P20-201ENST00000402555 677 ntBASIC5.32□□□□□ -1.56
RAE1P78406 HMGB1P13-201ENST00000406019 642 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AL009179.1-201ENST00000406085 265 ntBASIC5.32□□□□□ -1.56
RAE1P78406 RN7SKP97-201ENST00000410966 333 ntBASIC5.32□□□□□ -1.56
RAE1P78406 PTP4A1P1-201ENST00000420539 515 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.32□□□□□ -1.56
RAE1P78406 AC007161.1-204ENST00000423039 460 ntBASIC5.32□□□□□ -1.56
RAE1P78406 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.32□□□□□ -1.56
RAE1P78406 NAP1L4P2-201ENST00000425958 899 ntBASIC5.32□□□□□ -1.56
RAE1P78406 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 GTF2IP3-201ENST00000433887 494 ntBASIC5.32□□□□□ -1.56
RAE1P78406 NPM1P18-201ENST00000434232 732 ntBASIC5.32□□□□□ -1.56
RAE1P78406 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.32□□□□□ -1.56
RAE1P78406 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 AC097499.1-201ENST00000444277 208 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.32□□□□□ -1.56
RAE1P78406 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.32□□□□□ -1.56
RAE1P78406 UBFD1P1-201ENST00000473259 814 ntBASIC5.32□□□□□ -1.56
RAE1P78406 RN7SL741P-201ENST00000482473 289 ntBASIC5.32□□□□□ -1.56
RAE1P78406 RPS12P31-201ENST00000491419 398 ntBASIC5.32□□□□□ -1.56
RAE1P78406 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 SUMO2P4-201ENST00000504193 276 ntBASIC5.32□□□□□ -1.56
RAE1P78406 CDH12P2-201ENST00000504393 298 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.32□□□□□ -1.56
RAE1P78406 RNA5SP271-201ENST00000516700 88 ntBASIC5.32□□□□□ -1.56
RAE1P78406 SEPT10P1-201ENST00000517342 1162 ntBASIC5.32□□□□□ -1.56
RAE1P78406 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 TOMM20P1-201ENST00000534518 427 ntBASIC5.32□□□□□ -1.56
RAE1P78406 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 AC087897.1-201ENST00000550134 156 ntBASIC5.32□□□□□ -1.56
RAE1P78406 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.32□□□□□ -1.56
RAE1P78406 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.32□□□□□ -1.56
RAE1P78406 AC008751.2-201ENST00000597885 980 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.32□□□□□ -1.56
RAE1P78406 AC025574.2-201ENST00000615621 514 ntBASIC5.32□□□□□ -1.56
RAE1P78406 RNA5SP439-201ENST00000617595 124 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AP004607.9-201ENST00000618202 316 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AC009039.2-201ENST00000624524 529 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AC024023.1-201ENST00000624530 922 ntBASIC5.32□□□□□ -1.56
RAE1P78406 CU459211.1-201ENST00000635667 749 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms