Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.54□□□□□ -1.52
TPM4P67936 RPS29P9-201ENST00000440360 171 ntBASIC5.54□□□□□ -1.52
TPM4P67936 RPL36AP39-201ENST00000445859 318 ntBASIC5.54□□□□□ -1.52
TPM4P67936 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.54□□□□□ -1.52
TPM4P67936 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.54□□□□□ -1.52
TPM4P67936 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.54□□□□□ -1.52
TPM4P67936 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM4P67936 RPL5P16-201ENST00000471467 790 ntBASIC5.54□□□□□ -1.52
TPM4P67936 RPL21P6-201ENST00000479171 504 ntBASIC5.54□□□□□ -1.52
TPM4P67936 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.54□□□□□ -1.52
TPM4P67936 UGT2A3P7-201ENST00000510485 734 ntBASIC5.54□□□□□ -1.52
TPM4P67936 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TPM4P67936 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TPM4P67936 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.54□□□□□ -1.52
TPM4P67936 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.54□□□□□ -1.52
TPM4P67936 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM4P67936 AC069307.1-201ENST00000602820 447 ntBASIC5.54□□□□□ -1.52
TPM4P67936 AC012414.7-202ENST00000622705 1090 ntBASIC5.54□□□□□ -1.52
TPM4P67936 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TPM4P67936 OR51C1P-202ENST00000641159 1444 ntBASIC5.54□□□□□ -1.52
TPM4P67936 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.54□□□□□ -1.52
TPM4P67936 AC097461.1-201ENST00000568928 2821 ntBASIC5.54□□□□□ -1.52
TPM4P67936 AC091305.2-201ENST00000624049 1576 ntBASIC5.54□□□□□ -1.52
TPM4P67936 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.54□□□□□ -1.52
TPM4P67936 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TPM4P67936 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 AC235565.1-201ENST00000456962 1325 ntBASIC5.53□□□□□ -1.52
TPM4P67936 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.53□□□□□ -1.52
TPM4P67936 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TPM4P67936 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 SNORA70.10-201ENST00000384515 134 ntBASIC5.53□□□□□ -1.52
TPM4P67936 RNA5SP284-201ENST00000384547 118 ntBASIC5.53□□□□□ -1.52
TPM4P67936 OR7E156P-201ENST00000400303 464 ntBASIC5.53□□□□□ -1.52
TPM4P67936 LYPLA1P3-201ENST00000402650 695 ntBASIC5.53□□□□□ -1.52
TPM4P67936 SNORA77-201ENST00000408716 125 ntBASIC5.53□□□□□ -1.52
TPM4P67936 RN7SKP240-201ENST00000410583 375 ntBASIC5.53□□□□□ -1.52
TPM4P67936 RNU2-22P-201ENST00000411266 212 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AL390774.1-201ENST00000411924 246 ntBASIC5.53□□□□□ -1.52
TPM4P67936 CYCSP10-201ENST00000417973 294 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 AL354714.3-201ENST00000447284 493 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 RNU7-157P-201ENST00000459600 66 ntBASIC5.53□□□□□ -1.52
TPM4P67936 RPL35AP19-201ENST00000469425 329 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.53□□□□□ -1.52
TPM4P67936 AC093890.1-201ENST00000502554 540 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AC027544.3-201ENST00000535082 757 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM4P67936 AC011270.1-201ENST00000558606 583 ntBASIC5.53□□□□□ -1.52
TPM4P67936 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.53□□□□□ -1.52
TPM4P67936 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM4P67936 SUGT1P3-202ENST00000604259 383 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AC104687.2-201ENST00000604442 342 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM4P67936 MIR6889-201ENST00000613185 59 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AL049794.2-201ENST00000616301 365 ntBASIC5.53□□□□□ -1.52
TPM4P67936 MIR6071-201ENST00000616741 78 ntBASIC5.53□□□□□ -1.52
TPM4P67936 AC015660.5-201ENST00000623238 564 ntBASIC5.53□□□□□ -1.52
TPM4P67936 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TPM4P67936 AC009643.2-201ENST00000603543 1448 ntBASIC5.53□□□□□ -1.52
TPM4P67936 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM4P67936 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM4P67936 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM4P67936 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM4P67936 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM4P67936 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TPM4P67936 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM4P67936 AC008549.2-201ENST00000333482 706 ntBASIC5.52□□□□□ -1.53
TPM4P67936 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TPM4P67936 RN7SKP187-201ENST00000365536 330 ntBASIC5.52□□□□□ -1.53
TPM4P67936 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM4P67936 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.52□□□□□ -1.53
TPM4P67936 MTND6P5-201ENST00000448266 512 ntBASIC5.52□□□□□ -1.53
TPM4P67936 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM4P67936 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM4P67936 SNORD46.2-201ENST00000516021 102 ntBASIC5.52□□□□□ -1.53
TPM4P67936 AC134698.5-201ENST00000519444 336 ntBASIC5.52□□□□□ -1.53
TPM4P67936 AC012339.2-201ENST00000523996 453 ntBASIC5.52□□□□□ -1.53
TPM4P67936 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM4P67936 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.52□□□□□ -1.53
TPM4P67936 NANOGNBP2-201ENST00000544753 553 ntBASIC5.52□□□□□ -1.53
TPM4P67936 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM4P67936 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM4P67936 MIR4271-201ENST00000582451 67 ntBASIC5.52□□□□□ -1.53
TPM4P67936 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.52□□□□□ -1.53
TPM4P67936 AC087283.1-201ENST00000604029 1074 ntBASIC5.52□□□□□ -1.53
TPM4P67936 AC019206.1-201ENST00000621938 425 ntBASIC5.52□□□□□ -1.53
TPM4P67936 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms