Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.88□□□□□ -1.63
VSX2P58304 BX842559.2-201ENST00000451418 605 ntBASIC4.88□□□□□ -1.63
VSX2P58304 RN7SL329P-201ENST00000467740 299 ntBASIC4.88□□□□□ -1.63
VSX2P58304 NDUFA5P12-201ENST00000503796 343 ntBASIC4.88□□□□□ -1.63
VSX2P58304 RNU6-513P-201ENST00000516104 104 ntBASIC4.88□□□□□ -1.63
VSX2P58304 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.88□□□□□ -1.63
VSX2P58304 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.88□□□□□ -1.63
VSX2P58304 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.88□□□□□ -1.63
VSX2P58304 MIR4472-2-201ENST00000582069 67 ntBASIC4.88□□□□□ -1.63
VSX2P58304 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.88□□□□□ -1.63
VSX2P58304 BNIP3P32-201ENST00000600015 554 ntBASIC4.88□□□□□ -1.63
VSX2P58304 AC016252.1-201ENST00000609721 474 ntBASIC4.88□□□□□ -1.63
VSX2P58304 EIF3FP1-201ENST00000613970 806 ntBASIC4.88□□□□□ -1.63
VSX2P58304 AF117829.2-201ENST00000619538 361 ntBASIC4.88□□□□□ -1.63
VSX2P58304 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.88□□□□□ -1.63
VSX2P58304 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.88□□□□□ -1.63
VSX2P58304 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.88□□□□□ -1.63
VSX2P58304 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.88□□□□□ -1.63
VSX2P58304 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.88□□□□□ -1.63
VSX2P58304 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
VSX2P58304 NXF4-202ENST00000416098 1465 ntBASIC4.88□□□□□ -1.63
VSX2P58304 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.87□□□□□ -1.63
VSX2P58304 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 MIR937-201ENST00000401271 86 ntBASIC4.87□□□□□ -1.63
VSX2P58304 AL589647.1-201ENST00000402485 466 ntBASIC4.87□□□□□ -1.63
VSX2P58304 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 AC006455.6-201ENST00000426192 893 ntBASIC4.87□□□□□ -1.63
VSX2P58304 RBMY2QP-201ENST00000429799 1147 ntBASIC4.87□□□□□ -1.63
VSX2P58304 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 NDUFA5P8-201ENST00000449019 346 ntBASIC4.87□□□□□ -1.63
VSX2P58304 RPS4XP12-201ENST00000461747 709 ntBASIC4.87□□□□□ -1.63
VSX2P58304 AC091180.1-201ENST00000462104 372 ntBASIC4.87□□□□□ -1.63
VSX2P58304 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.87□□□□□ -1.63
VSX2P58304 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.87□□□□□ -1.63
VSX2P58304 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.87□□□□□ -1.63
VSX2P58304 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.87□□□□□ -1.63
VSX2P58304 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.87□□□□□ -1.63
VSX2P58304 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 RNU6-84P-201ENST00000607737 102 ntBASIC4.87□□□□□ -1.63
VSX2P58304 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.87□□□□□ -1.63
VSX2P58304 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VSX2P58304 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VSX2P58304 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VSX2P58304 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.86□□□□□ -1.63
VSX2P58304 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.86□□□□□ -1.63
VSX2P58304 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 SNORA2.3-201ENST00000383920 135 ntBASIC4.86□□□□□ -1.63
VSX2P58304 SNORA66-201ENST00000384792 133 ntBASIC4.86□□□□□ -1.63
VSX2P58304 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VSX2P58304 CHMP1B2P-201ENST00000399581 597 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AL645733.1-201ENST00000402250 217 ntBASIC4.86□□□□□ -1.63
VSX2P58304 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VSX2P58304 OR6C64P-201ENST00000419708 825 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 AC009238.2-201ENST00000431026 355 ntBASIC4.86□□□□□ -1.63
VSX2P58304 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 RPL34P20-201ENST00000442771 351 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.86□□□□□ -1.63
VSX2P58304 KNOP1P3-201ENST00000446933 426 ntBASIC4.86□□□□□ -1.63
VSX2P58304 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.86□□□□□ -1.63
VSX2P58304 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 RN7SL244P-201ENST00000493405 297 ntBASIC4.86□□□□□ -1.63
VSX2P58304 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 AC010350.1-201ENST00000504908 231 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AC111000.5-201ENST00000506559 1178 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 AC110775.1-201ENST00000513721 462 ntBASIC4.86□□□□□ -1.63
VSX2P58304 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.86□□□□□ -1.63
VSX2P58304 AP000859.1-201ENST00000525536 307 ntBASIC4.86□□□□□ -1.63
VSX2P58304 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms