Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SKP69-201ENST00000365390 305 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 RN7SKP81-201ENST00000365603 331 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 RNU6-224P-201ENST00000384055 107 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 snosnR66.1-201ENST00000391095 99 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 SNORA17A-201ENST00000391185 133 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.4□□□□□ -1.38
EPHB3P54753 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 AL049610.1-201ENST00000423374 372 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 MTND1P32-201ENST00000433043 938 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 NDUFS5P5-201ENST00000437256 321 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AL391987.1-201ENST00000441025 200 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 AC016027.4-201ENST00000450866 277 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 LINC00888-204ENST00000487386 421 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC083795.1-201ENST00000491760 320 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC133963.2-201ENST00000513686 578 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC022447.1-201ENST00000515358 464 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 RNU6-1334P-201ENST00000516032 105 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 Y_RNA.695-201ENST00000516715 107 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 NPM1P52-201ENST00000518264 846 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 AC124293.1-201ENST00000530034 493 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 ELOCP32-201ENST00000548625 324 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.4□□□□□ -1.38
EPHB3P54753 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 AP001269.3-201ENST00000588718 329 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 ELOCP28-201ENST00000590044 317 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.4□□□□□ -1.38
EPHB3P54753 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 AP002884.5-201ENST00000595053 1132 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 AC010857.1-201ENST00000606398 594 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 MIR6809-201ENST00000612189 116 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 AC127024.6-201ENST00000621598 424 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC009878.1-201ENST00000621819 340 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AF246928.1-201ENST00000623768 87 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 SNORA17.5-201ENST00000630429 132 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AL596275.2-208ENST00000641192 594 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 MTND5P11-201ENST00000511037 1812 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
EPHB3P54753 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
EPHB3P54753 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
EPHB3P54753 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.4□□□□□ -1.39
EPHB3P54753 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
EPHB3P54753 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.4□□□□□ -1.39
EPHB3P54753 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.4□□□□□ -1.39
EPHB3P54753 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
EPHB3P54753 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.4□□□□□ -1.39
EPHB3P54753 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
EPHB3P54753 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
EPHB3P54753 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.4□□□□□ -1.39
EPHB3P54753 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 CR848007.1-201ENST00000442354 1699 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 AC007382.1-201ENST00000624376 2618 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC105749.1-201ENST00000631338 2008 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
EPHB3P54753 RNU6-252P-201ENST00000363232 107 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
EPHB3P54753 RNU6-761P-201ENST00000384148 107 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 Y_RNA.578-201ENST00000390903 88 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 AL096800.1-201ENST00000405326 893 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 MIR1203-201ENST00000408812 85 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
EPHB3P54753 RN7SKP206-201ENST00000410823 293 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 RPS15AP30-201ENST00000420976 390 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 BX284632.2-201ENST00000421091 399 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
EPHB3P54753 ZNF863P-201ENST00000426746 417 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 MTND6P12-201ENST00000428247 522 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.39□□□□□ -1.39
EPHB3P54753 AC242426.1-201ENST00000435270 960 ntBASIC6.39□□□□□ -1.39
EPHB3P54753 AC098614.3-201ENST00000438957 440 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms