Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFC4P35249 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RFC4P35249 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RFC4P35249 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.33□□□□□ -1.4
RFC4P35249 SNORA2.3-201ENST00000383920 135 ntBASIC6.33□□□□□ -1.4
RFC4P35249 TRAV35-201ENST00000390462 330 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AL136116.2-201ENST00000404020 785 ntBASIC6.33□□□□□ -1.4
RFC4P35249 SNORA77-201ENST00000408716 125 ntBASIC6.33□□□□□ -1.4
RFC4P35249 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.33□□□□□ -1.4
RFC4P35249 AC073143.1-201ENST00000436316 395 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC010733.1-201ENST00000451515 401 ntBASIC6.33□□□□□ -1.4
RFC4P35249 snoU13.29-201ENST00000459370 104 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC090589.1-201ENST00000473109 362 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.33□□□□□ -1.4
RFC4P35249 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.33□□□□□ -1.4
RFC4P35249 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.33□□□□□ -1.4
RFC4P35249 AP002981.1-201ENST00000517692 975 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.33□□□□□ -1.4
RFC4P35249 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.33□□□□□ -1.4
RFC4P35249 AP003080.1-202ENST00000526526 915 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.33□□□□□ -1.4
RFC4P35249 AC020910.2-201ENST00000603635 610 ntBASIC6.33□□□□□ -1.4
RFC4P35249 AC098935.2-201ENST00000604222 466 ntBASIC6.33□□□□□ -1.4
RFC4P35249 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFC4P35249 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RFC4P35249 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFC4P35249 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.33□□□□□ -1.4
RFC4P35249 AC138907.8-201ENST00000623981 2256 ntBASIC6.33□□□□□ -1.4
RFC4P35249 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RFC4P35249 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RFC4P35249 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC4P35249 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RFC4P35249 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC4P35249 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.32□□□□□ -1.4
RFC4P35249 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 AC006210.2-201ENST00000367074 1545 ntBASIC6.32□□□□□ -1.4
RFC4P35249 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC4P35249 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 FAM3C2-201ENST00000312214 681 ntBASIC6.32□□□□□ -1.4
RFC4P35249 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RFC4P35249 U3.22-201ENST00000391120 215 ntBASIC6.32□□□□□ -1.4
RFC4P35249 RPL17P36-201ENST00000420302 549 ntBASIC6.32□□□□□ -1.4
RFC4P35249 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.32□□□□□ -1.4
RFC4P35249 AC090018.1-201ENST00000434369 367 ntBASIC6.32□□□□□ -1.4
RFC4P35249 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 TVP23CP2-201ENST00000571473 623 ntBASIC6.32□□□□□ -1.4
RFC4P35249 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.32□□□□□ -1.4
RFC4P35249 AP000919.1-201ENST00000582850 985 ntBASIC6.32□□□□□ -1.4
RFC4P35249 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC4P35249 MIR6830-201ENST00000636015 70 ntBASIC6.32□□□□□ -1.4
RFC4P35249 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RFC4P35249 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC4P35249 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC4P35249 AC139713.2-214ENST00000642059 1811 ntBASIC6.32□□□□□ -1.4
RFC4P35249 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC4P35249 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 RNA5SP479-201ENST00000364858 117 ntBASIC6.31□□□□□ -1.4
RFC4P35249 RNA5SP223-201ENST00000365174 120 ntBASIC6.31□□□□□ -1.4
RFC4P35249 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC4P35249 CHIAP3-201ENST00000423668 1133 ntBASIC6.31□□□□□ -1.4
RFC4P35249 OR2B7P-201ENST00000429302 934 ntBASIC6.31□□□□□ -1.4
RFC4P35249 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC4P35249 RPL23AP56-201ENST00000460778 453 ntBASIC6.31□□□□□ -1.4
RFC4P35249 RN7SL814P-201ENST00000487715 300 ntBASIC6.31□□□□□ -1.4
RFC4P35249 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC4P35249 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC4P35249 RN7SKP122-201ENST00000515923 296 ntBASIC6.31□□□□□ -1.4
RFC4P35249 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RFC4P35249 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 AL110118.1-201ENST00000553543 400 ntBASIC6.31□□□□□ -1.4
RFC4P35249 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC4P35249 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC4P35249 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RFC4P35249 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms