Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RPL23AP59-201ENST00000399415 461 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 SNORA11.3-201ENST00000408471 128 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 RPL34P3-201ENST00000421454 338 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ABCD3P28288 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 LRRC37A14P-201ENST00000452297 462 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC002553.2-201ENST00000453217 340 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AL035407.2-201ENST00000454090 378 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 RPL7P45-201ENST00000455851 743 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 AC093719.1-201ENST00000480427 441 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 RPL7P40-201ENST00000481703 745 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 RN7SL284P-201ENST00000498823 275 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 AC119751.4-201ENST00000507498 357 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCD3P28288 RNU6-615P-201ENST00000516065 106 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCD3P28288 AC136777.2-201ENST00000522979 358 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC104115.2-201ENST00000523026 687 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 MRPS16P1-201ENST00000523462 412 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 IGBP1P1-201ENST00000554337 1009 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCD3P28288 AC027104.1-201ENST00000563702 681 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCD3P28288 VN1R84P-201ENST00000593697 235 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCD3P28288 AC025857.2-201ENST00000602711 238 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 HIRAP1-201ENST00000605318 787 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 AF129408.1-201ENST00000608767 431 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 SNORA11.6-201ENST00000619030 128 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC073569.3-201ENST00000619055 682 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AC127024.6-201ENST00000621598 424 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 AL390318.1-201ENST00000624564 687 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 AL590396.2-201ENST00000636511 1041 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 LINC02019-201ENST00000608605 2060 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 SEC63P2-201ENST00000503863 1939 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ABCD3P28288 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
ABCD3P28288 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
ABCD3P28288 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
ABCD3P28288 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.25□□□□□ -1.57
ABCD3P28288 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
ABCD3P28288 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ABCD3P28288 AL158152.1-201ENST00000602652 1435 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCD3P28288 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ABCD3P28288 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCD3P28288 RNA5SP30-201ENST00000365552 115 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AC234772.1-201ENST00000377927 937 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 RNU6-207P-201ENST00000384137 107 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ABCD3P28288 RNU6-1000P-201ENST00000391066 106 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AL590290.1-201ENST00000405336 380 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 RN7SKP279-201ENST00000411383 298 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 OR2AT2P-201ENST00000413438 905 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.25□□□□□ -1.57
ABCD3P28288 AC115285.1-201ENST00000424879 736 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 SEC63P1-201ENST00000425785 1258 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.25□□□□□ -1.57
ABCD3P28288 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.25□□□□□ -1.57
ABCD3P28288 AL389925.1-201ENST00000432257 728 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCD3P28288 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.25□□□□□ -1.57
ABCD3P28288 SUMO2P3-201ENST00000438311 288 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AC064862.4-201ENST00000442180 334 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 RPL36AP39-201ENST00000445859 318 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AL096803.2-201ENST00000450032 677 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 RPL10P17-201ENST00000453852 316 ntBASIC5.25□□□□□ -1.57
ABCD3P28288 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms