Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-462P-201ENST00000362659 105 ntBASIC7.55□□□□□ -1.2
RFX1P22670 RNA5SP114-201ENST00000363780 113 ntBASIC7.55□□□□□ -1.2
RFX1P22670 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 RNU6-1151P-201ENST00000384684 107 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.55□□□□□ -1.2
RFX1P22670 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 AC009518.3-201ENST00000438972 253 ntBASIC7.55□□□□□ -1.2
RFX1P22670 RPL12P11-201ENST00000439970 501 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC011742.2-201ENST00000443818 352 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.55□□□□□ -1.2
RFX1P22670 VN1R10P-201ENST00000447106 875 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 RPL26P28-201ENST00000451325 435 ntBASIC7.55□□□□□ -1.2
RFX1P22670 OR7E7P-201ENST00000455678 1012 ntBASIC7.55□□□□□ -1.2
RFX1P22670 RPS3AP49-201ENST00000472161 790 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX1P22670 AC023424.2-201ENST00000493479 777 ntBASIC7.55□□□□□ -1.2
RFX1P22670 RN7SL143P-201ENST00000496780 297 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC009567.2-201ENST00000502989 349 ntBASIC7.55□□□□□ -1.2
RFX1P22670 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.55□□□□□ -1.2
RFX1P22670 IGKV2-36-201ENST00000519999 223 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX1P22670 AC107958.1-201ENST00000556576 290 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX1P22670 MIR5682-201ENST00000584864 76 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX1P22670 AC005084.1-201ENST00000605160 304 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC131009.3-201ENST00000621809 287 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AL132796.3-201ENST00000624703 900 ntBASIC7.55□□□□□ -1.2
RFX1P22670 CDRT1-208ENST00000630868 794 ntBASIC7.55□□□□□ -1.2
RFX1P22670 AC140479.4-205ENST00000636339 820 ntBASIC7.55□□□□□ -1.2
RFX1P22670 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 MTND5P26-201ENST00000426018 1752 ntBASIC7.55□□□□□ -1.2
RFX1P22670 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.55□□□□□ -1.2
RFX1P22670 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 MAPK10-270ENST00000641102 3538 ntBASIC7.55□□□□□ -1.2
RFX1P22670 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.55□□□□□ -1.2
RFX1P22670 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 CCDC150P1-201ENST00000537123 2215 ntBASIC7.54□□□□□ -1.2
RFX1P22670 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 RNU5F-7P-201ENST00000363696 115 ntBASIC7.54□□□□□ -1.2
RFX1P22670 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 RNU5A-6P-201ENST00000384136 116 ntBASIC7.54□□□□□ -1.2
RFX1P22670 MIR323B-201ENST00000385269 82 ntBASIC7.54□□□□□ -1.2
RFX1P22670 RNA5SP53-201ENST00000391299 120 ntBASIC7.54□□□□□ -1.2
RFX1P22670 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 RPS6P23-201ENST00000413224 722 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.54□□□□□ -1.2
RFX1P22670 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 USP9YP18-201ENST00000425912 695 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AC005033.1-201ENST00000428904 813 ntBASIC7.54□□□□□ -1.2
RFX1P22670 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.54□□□□□ -1.2
RFX1P22670 AC022022.1-201ENST00000430304 178 ntBASIC7.54□□□□□ -1.2
RFX1P22670 VN1R54P-201ENST00000435210 1049 ntBASIC7.54□□□□□ -1.2
RFX1P22670 CBX1P4-201ENST00000439415 457 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AL845321.1-201ENST00000444603 348 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AC239367.2-201ENST00000447309 705 ntBASIC7.54□□□□□ -1.2
RFX1P22670 VN1R34P-201ENST00000447387 883 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 SLC31A1P1-201ENST00000451221 567 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.54□□□□□ -1.2
RFX1P22670 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.54□□□□□ -1.2
RFX1P22670 RNA5SP518-201ENST00000515957 119 ntBASIC7.54□□□□□ -1.2
RFX1P22670 RN7SKP70-201ENST00000516655 271 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 OR6M2P-201ENST00000529831 871 ntBASIC7.54□□□□□ -1.2
RFX1P22670 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.54□□□□□ -1.2
RFX1P22670 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 OR5BK1P-201ENST00000550421 823 ntBASIC7.54□□□□□ -1.2
RFX1P22670 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms