Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH3P22223 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AL359265.1-201ENST00000440296 795 ntBASIC5.26□□□□□ -1.57
CDH3P22223 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 RPL7L1P1-201ENST00000448259 785 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AC025181.1-201ENST00000477507 416 ntBASIC5.26□□□□□ -1.57
CDH3P22223 RPS4XP1-201ENST00000482189 787 ntBASIC5.26□□□□□ -1.57
CDH3P22223 UBA52P7-201ENST00000486088 380 ntBASIC5.26□□□□□ -1.57
CDH3P22223 RN7SL30P-201ENST00000488416 306 ntBASIC5.26□□□□□ -1.57
CDH3P22223 RPS17P5-201ENST00000498293 408 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AC117525.1-201ENST00000515228 503 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AC026688.1-201ENST00000520639 1168 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AL049779.2-201ENST00000553847 315 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH3P22223 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH3P22223 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH3P22223 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 AC127024.5-201ENST00000580085 462 ntBASIC5.26□□□□□ -1.57
CDH3P22223 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH3P22223 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AL512329.2-201ENST00000607350 548 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AL023583.1-201ENST00000607518 1143 ntBASIC5.26□□□□□ -1.57
CDH3P22223 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 AC026367.3-201ENST00000619032 590 ntBASIC5.26□□□□□ -1.57
CDH3P22223 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 AL163152.1-201ENST00000642001 374 ntBASIC5.26□□□□□ -1.57
CDH3P22223 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH3P22223 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH3P22223 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH3P22223 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CDH3P22223 AC021242.1-201ENST00000507315 2035 ntBASIC5.26□□□□□ -1.57
CDH3P22223 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CDH3P22223 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 OR55B1P-203ENST00000641518 2602 ntBASIC5.26□□□□□ -1.57
CDH3P22223 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH3P22223 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 ZNF652P1-201ENST00000442420 1309 ntBASIC5.25□□□□□ -1.57
CDH3P22223 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 AC104623.2-202ENST00000623477 4002 ntBASIC5.25□□□□□ -1.57
CDH3P22223 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH3P22223 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 MIR133B-201ENST00000362210 119 ntBASIC5.25□□□□□ -1.57
CDH3P22223 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 SNORA16A-201ENST00000384342 137 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AL390774.1-201ENST00000411924 246 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AL512504.1-201ENST00000415494 778 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH3P22223 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 AL590623.1-201ENST00000427864 105 ntBASIC5.25□□□□□ -1.57
CDH3P22223 DSTNP5-201ENST00000427921 523 ntBASIC5.25□□□□□ -1.57
CDH3P22223 MTATP6P11-201ENST00000428071 670 ntBASIC5.25□□□□□ -1.57
CDH3P22223 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH3P22223 FAM96AP1-201ENST00000430879 482 ntBASIC5.25□□□□□ -1.57
CDH3P22223 RPL34P6-201ENST00000432390 345 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AL606490.8-201ENST00000441624 319 ntBASIC5.25□□□□□ -1.57
CDH3P22223 RPS11P7-201ENST00000442125 465 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AL163193.1-201ENST00000444895 788 ntBASIC5.25□□□□□ -1.57
CDH3P22223 MYO5BP2-201ENST00000449815 1277 ntBASIC5.25□□□□□ -1.57
CDH3P22223 RNA5SP103-201ENST00000459503 118 ntBASIC5.25□□□□□ -1.57
CDH3P22223 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 AC026348.1-201ENST00000462549 1053 ntBASIC5.25□□□□□ -1.57
CDH3P22223 RN7SL515P-201ENST00000463999 297 ntBASIC5.25□□□□□ -1.57
CDH3P22223 PSAT1P4-201ENST00000466500 526 ntBASIC5.25□□□□□ -1.57
CDH3P22223 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH3P22223 COPS8P2-201ENST00000473228 627 ntBASIC5.25□□□□□ -1.57
CDH3P22223 RPEP1-201ENST00000504507 658 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH3P22223 HMGB1P44-201ENST00000508597 572 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH3P22223 RNA5SP34-201ENST00000516887 130 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH3P22223 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH3P22223 HMGB1P40-201ENST00000525121 540 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms