Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.36□□□□□ -1.23
LMNB1P20700 CASP3P1-201ENST00000446037 609 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AC233982.1-201ENST00000451247 436 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 MTCO2P18-201ENST00000457151 658 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 RPS23P6-201ENST00000466136 431 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 HIGD1AP14-201ENST00000507617 282 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.36□□□□□ -1.23
LMNB1P20700 RNU6-759P-201ENST00000516740 103 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.36□□□□□ -1.23
LMNB1P20700 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.36□□□□□ -1.23
LMNB1P20700 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.36□□□□□ -1.23
LMNB1P20700 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
LMNB1P20700 AC064872.1-201ENST00000604823 1072 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 AL512329.2-201ENST00000607350 548 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 AL121890.3-201ENST00000618494 516 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AL157770.1-201ENST00000623049 439 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LMNB1P20700 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 UGT2B27P-201ENST00000505092 1620 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.36□□□□□ -1.23
LMNB1P20700 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
LMNB1P20700 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
LMNB1P20700 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
LMNB1P20700 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 NXF4-202ENST00000416098 1465 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 AC010132.2-201ENST00000295493 1043 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 Y_RNA.194-201ENST00000363985 102 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 ATP5F1P3-201ENST00000397213 657 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 ERHP2-201ENST00000402323 299 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 SNRPEP6-201ENST00000407465 277 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 RNU4-74P-201ENST00000411280 161 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC010385.1-201ENST00000412374 256 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC7.35□□□□□ -1.23
LMNB1P20700 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.35□□□□□ -1.23
LMNB1P20700 BTF3P9-201ENST00000418784 283 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC7.35□□□□□ -1.23
LMNB1P20700 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.35□□□□□ -1.23
LMNB1P20700 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.35□□□□□ -1.23
LMNB1P20700 AL593851.1-201ENST00000426171 157 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 RAC1P8-201ENST00000427086 527 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 COX7BP2-201ENST00000437976 242 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC7.35□□□□□ -1.23
LMNB1P20700 VN1R32P-201ENST00000452234 905 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 RN7SL72P-201ENST00000460697 269 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC108161.1-201ENST00000461060 402 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
LMNB1P20700 AC080014.1-201ENST00000496877 1201 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC107401.1-201ENST00000503426 685 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 AGGF1P7-201ENST00000562369 913 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 AP001981.2-201ENST00000603241 418 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC072039.2-201ENST00000608883 439 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC008115.3-201ENST00000614874 549 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.35□□□□□ -1.23
LMNB1P20700 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 AC110597.1-201ENST00000562669 3176 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 CR382285.2-201ENST00000624662 1495 ntBASIC7.35□□□□□ -1.23
LMNB1P20700 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LMNB1P20700 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.35□□□□□ -1.23
LMNB1P20700 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LMNB1P20700 AL356473.1-201ENST00000406203 1408 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms