Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.28□□□□□ -1.08
CFTRP13569 AC114781.5-201ENST00000615297 108 ntBASIC8.28□□□□□ -1.08
CFTRP13569 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
CFTRP13569 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
CFTRP13569 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CFTRP13569 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CFTRP13569 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CFTRP13569 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC8.28□□□□□ -1.08
CFTRP13569 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.28□□□□□ -1.08
CFTRP13569 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CFTRP13569 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CFTRP13569 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CFTRP13569 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CFTRP13569 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.27□□□□□ -1.08
CFTRP13569 MIR659-201ENST00000384963 97 ntBASIC8.27□□□□□ -1.09
CFTRP13569 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC8.27□□□□□ -1.09
CFTRP13569 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.27□□□□□ -1.09
CFTRP13569 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.27□□□□□ -1.09
CFTRP13569 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.27□□□□□ -1.09
CFTRP13569 AC079168.2-201ENST00000453977 416 ntBASIC8.27□□□□□ -1.09
CFTRP13569 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.27□□□□□ -1.09
CFTRP13569 AC022034.3-201ENST00000471393 478 ntBASIC8.27□□□□□ -1.09
CFTRP13569 AC073358.1-201ENST00000505671 684 ntBASIC8.27□□□□□ -1.09
CFTRP13569 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.27□□□□□ -1.09
CFTRP13569 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.27□□□□□ -1.09
CFTRP13569 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.27□□□□□ -1.09
CFTRP13569 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.27□□□□□ -1.09
CFTRP13569 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.27□□□□□ -1.09
CFTRP13569 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.27□□□□□ -1.09
CFTRP13569 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.27□□□□□ -1.09
CFTRP13569 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CFTRP13569 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CFTRP13569 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.27□□□□□ -1.09
CFTRP13569 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFTRP13569 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFTRP13569 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.27□□□□□ -1.09
CFTRP13569 OR14L1P-202ENST00000641545 3009 ntBASIC8.27□□□□□ -1.09
CFTRP13569 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFTRP13569 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
CFTRP13569 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CFTRP13569 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 RNU1-85P-201ENST00000364127 164 ntBASIC8.26□□□□□ -1.09
CFTRP13569 RN7SKP280-201ENST00000364196 304 ntBASIC8.26□□□□□ -1.09
CFTRP13569 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CFTRP13569 AL358176.3-201ENST00000420757 454 ntBASIC8.26□□□□□ -1.09
CFTRP13569 OR4C10P-201ENST00000434991 931 ntBASIC8.26□□□□□ -1.09
CFTRP13569 CREM-230ENST00000474931 626 ntTSL 2 BASIC8.26□□□□□ -1.09
CFTRP13569 MRPL49P2-201ENST00000521066 465 ntBASIC8.26□□□□□ -1.09
CFTRP13569 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.26□□□□□ -1.09
CFTRP13569 AC027369.5-201ENST00000533838 755 ntBASIC8.26□□□□□ -1.09
CFTRP13569 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.26□□□□□ -1.09
CFTRP13569 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.26□□□□□ -1.09
CFTRP13569 AC022884.2-201ENST00000578535 580 ntBASIC8.26□□□□□ -1.09
CFTRP13569 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.26□□□□□ -1.09
CFTRP13569 AL133338.2-201ENST00000604292 736 ntBASIC8.26□□□□□ -1.09
CFTRP13569 AL121932.1-201ENST00000605542 214 ntBASIC8.26□□□□□ -1.09
CFTRP13569 RNA5SP196-201ENST00000625967 102 ntBASIC8.26□□□□□ -1.09
CFTRP13569 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CFTRP13569 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.26□□□□□ -1.09
CFTRP13569 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFTRP13569 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CFTRP13569 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC8.26□□□□□ -1.09
CFTRP13569 AL356387.2-201ENST00000422272 243 ntBASIC8.26□□□□□ -1.09
CFTRP13569 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.26□□□□□ -1.09
CFTRP13569 AC245389.1-201ENST00000605141 529 ntBASIC8.26□□□□□ -1.09
CFTRP13569 AL035461.2-201ENST00000619201 524 ntBASIC8.26□□□□□ -1.09
CFTRP13569 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.25□□□□□ -1.09
CFTRP13569 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.25□□□□□ -1.09
CFTRP13569 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFTRP13569 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CFTRP13569 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.25□□□□□ -1.09
CFTRP13569 AC107980.1-201ENST00000558671 3355 ntBASIC8.25□□□□□ -1.09
CFTRP13569 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CFTRP13569 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFTRP13569 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFTRP13569 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.25□□□□□ -1.09
CFTRP13569 AC004980.3-201ENST00000447046 365 ntBASIC8.25□□□□□ -1.09
CFTRP13569 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.25□□□□□ -1.09
CFTRP13569 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.25□□□□□ -1.09
CFTRP13569 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.25□□□□□ -1.09
CFTRP13569 AC010168.2-201ENST00000562691 5428 ntBASIC8.25□□□□□ -1.09
CFTRP13569 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC8.25□□□□□ -1.09
CFTRP13569 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFTRP13569 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.25□□□□□ -1.09
CFTRP13569 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.24□□□□□ -1.09
CFTRP13569 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 STX3-208ENST00000641815 3236 ntBASIC8.24□□□□□ -1.09
CFTRP13569 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms