Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AL158063.1-201ENST00000615349 536 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC022509.4-201ENST00000621404 572 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AF246928.1-201ENST00000623768 87 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AP003072.4-201ENST00000624580 310 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC087821.2-201ENST00000637086 450 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 OR5BE1P-202ENST00000641168 1176 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL6A2P12110 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL6A2P12110 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.15□□□□□ -1.43
COL6A2P12110 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
COL6A2P12110 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.15□□□□□ -1.43
COL6A2P12110 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
COL6A2P12110 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
COL6A2P12110 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL6A2P12110 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL6A2P12110 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 BRAFP1-201ENST00000445336 2703 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 AL731532.1-201ENST00000623972 4236 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 SNORA43.1-201ENST00000364863 140 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 AL031577.2-201ENST00000404133 280 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 RNA5SP155-201ENST00000411154 129 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.14□□□□□ -1.43
COL6A2P12110 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC009784.1-201ENST00000426484 460 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 GAPDHP34-201ENST00000432112 823 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AL731534.1-201ENST00000434711 269 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.14□□□□□ -1.43
COL6A2P12110 AL353093.1-201ENST00000441292 436 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 MTND3P1-201ENST00000441336 220 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 GAPDHP37-201ENST00000442317 968 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 TPMTP4-201ENST00000450749 678 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC073594.1-201ENST00000462065 364 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 RN7SL83P-201ENST00000468131 297 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 RPL12P31-201ENST00000478433 450 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 RN7SL655P-201ENST00000486087 298 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 RPL5P33-201ENST00000487833 905 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC069304.1-201ENST00000491593 704 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC060788.1-201ENST00000521318 469 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC083923.1-201ENST00000523708 376 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 UBE2NP1-201ENST00000545592 458 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.14□□□□□ -1.43
COL6A2P12110 CHEK2P2-201ENST00000554701 672 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AL049779.3-201ENST00000557141 606 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.14□□□□□ -1.43
COL6A2P12110 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL6A2P12110 RN7SL32P-201ENST00000580514 281 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AP001267.4-201ENST00000602598 545 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC100767.2-201ENST00000604840 693 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.14□□□□□ -1.43
COL6A2P12110 AP000254.1-201ENST00000609934 520 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AL139418.1-201ENST00000613613 177 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC007204.2-201ENST00000615022 616 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC024595.1-201ENST00000623088 387 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC007342.8-201ENST00000623278 678 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC092656.1-203ENST00000624134 423 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AL359740.1-201ENST00000624340 592 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC007494.3-201ENST00000624660 743 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC092104.1-201ENST00000497346 1441 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.14□□□□□ -1.43
COL6A2P12110 AC011503.2-201ENST00000594230 1500 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL6A2P12110 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.14□□□□□ -1.43
COL6A2P12110 NSRP1P1-201ENST00000444067 1693 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 AC245100.2-201ENST00000454544 1679 ntBASIC6.14□□□□□ -1.43
COL6A2P12110 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms