Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 AL358913.1-201ENST00000554342 121 ntBASIC5.32□□□□□ -1.56
RETP07949 SETP1-201ENST00000556014 845 ntBASIC5.32□□□□□ -1.56
RETP07949 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RETP07949 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 AC068790.4-201ENST00000602474 263 ntBASIC5.32□□□□□ -1.56
RETP07949 AL034374.2-201ENST00000605281 548 ntBASIC5.32□□□□□ -1.56
RETP07949 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.32□□□□□ -1.56
RETP07949 AL356608.1-201ENST00000610034 820 ntBASIC5.32□□□□□ -1.56
RETP07949 OR8G7P-201ENST00000616658 848 ntBASIC5.32□□□□□ -1.56
RETP07949 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
RETP07949 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RETP07949 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RETP07949 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RETP07949 AC097461.1-201ENST00000568928 2821 ntBASIC5.32□□□□□ -1.56
RETP07949 AC005005.4-201ENST00000623789 16698 ntBASIC5.32□□□□□ -1.56
RETP07949 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
RETP07949 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RETP07949 AC093591.2-201ENST00000565254 3843 ntBASIC5.31□□□□□ -1.56
RETP07949 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.31□□□□□ -1.56
RETP07949 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.31□□□□□ -1.56
RETP07949 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RETP07949 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 SNORA79B-201ENST00000410557 148 ntBASIC5.31□□□□□ -1.56
RETP07949 RIMKLBP2-201ENST00000424737 654 ntBASIC5.31□□□□□ -1.56
RETP07949 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 AC068287.1-201ENST00000430283 295 ntBASIC5.31□□□□□ -1.56
RETP07949 NANOGP9-201ENST00000439890 892 ntBASIC5.31□□□□□ -1.56
RETP07949 AC073465.2-201ENST00000440938 498 ntBASIC5.31□□□□□ -1.56
RETP07949 AL513533.1-201ENST00000453728 415 ntBASIC5.31□□□□□ -1.56
RETP07949 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 RN7SL354P-201ENST00000469282 294 ntBASIC5.31□□□□□ -1.56
RETP07949 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.31□□□□□ -1.56
RETP07949 AC079064.1-201ENST00000528365 362 ntBASIC5.31□□□□□ -1.56
RETP07949 AC134349.2-201ENST00000535136 910 ntBASIC5.31□□□□□ -1.56
RETP07949 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 ATP5J2P6-201ENST00000565203 266 ntBASIC5.31□□□□□ -1.56
RETP07949 AC136624.4-201ENST00000573044 370 ntBASIC5.31□□□□□ -1.56
RETP07949 MIR4284-201ENST00000578924 81 ntBASIC5.31□□□□□ -1.56
RETP07949 AC104687.2-201ENST00000604442 342 ntBASIC5.31□□□□□ -1.56
RETP07949 AC245389.2-201ENST00000616023 576 ntBASIC5.31□□□□□ -1.56
RETP07949 AC242843.1-201ENST00000618702 573 ntBASIC5.31□□□□□ -1.56
RETP07949 AC006840.1-201ENST00000623069 542 ntBASIC5.31□□□□□ -1.56
RETP07949 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.31□□□□□ -1.56
RETP07949 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.31□□□□□ -1.56
RETP07949 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RETP07949 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
RETP07949 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
RETP07949 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RETP07949 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.3□□□□□ -1.56
RETP07949 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RETP07949 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RETP07949 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.3□□□□□ -1.56
RETP07949 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.3□□□□□ -1.56
RETP07949 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RETP07949 AC132825.1-201ENST00000463573 2247 ntBASIC5.3□□□□□ -1.56
RETP07949 RN7SKP74-201ENST00000362849 309 ntBASIC5.3□□□□□ -1.56
RETP07949 SNORA70.2-201ENST00000364506 135 ntBASIC5.3□□□□□ -1.56
RETP07949 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
RETP07949 OR4K12P-201ENST00000406538 961 ntBASIC5.3□□□□□ -1.56
RETP07949 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.3□□□□□ -1.56
RETP07949 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.3□□□□□ -1.56
RETP07949 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.3□□□□□ -1.56
RETP07949 TAAR4P-201ENST00000454843 1039 ntBASIC5.3□□□□□ -1.56
RETP07949 RPS23P7-201ENST00000466210 444 ntBASIC5.3□□□□□ -1.56
RETP07949 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.3□□□□□ -1.56
RETP07949 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.3□□□□□ -1.56
RETP07949 PARP1P2-201ENST00000556806 195 ntBASIC5.3□□□□□ -1.56
RETP07949 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.3□□□□□ -1.56
RETP07949 AC009117.1-201ENST00000563948 554 ntBASIC5.3□□□□□ -1.56
RETP07949 MIR4737-201ENST00000583979 81 ntBASIC5.3□□□□□ -1.56
RETP07949 AL031320.1-201ENST00000604177 357 ntBASIC5.3□□□□□ -1.56
RETP07949 MIR6780A-201ENST00000615089 68 ntBASIC5.3□□□□□ -1.56
RETP07949 AL356752.1-201ENST00000615844 593 ntBASIC5.3□□□□□ -1.56
RETP07949 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.3□□□□□ -1.56
RETP07949 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RETP07949 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RETP07949 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RETP07949 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms