Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PDGFBP01127 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFBP01127 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFBP01127 AC114774.1-201ENST00000507410 1770 ntBASIC5.34□□□□□ -1.56
PDGFBP01127 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PDGFBP01127 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFBP01127 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFBP01127 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PDGFBP01127 SNORA48.7-201ENST00000391302 135 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AC116036.1-201ENST00000412199 367 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFBP01127 RPL12P17-201ENST00000432393 498 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFBP01127 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 AC006967.1-201ENST00000467608 589 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 RN7SL423P-201ENST00000486202 304 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.33□□□□□ -1.56
PDGFBP01127 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.33□□□□□ -1.56
PDGFBP01127 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.33□□□□□ -1.56
PDGFBP01127 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.33□□□□□ -1.56
PDGFBP01127 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 BNIP3P33-201ENST00000598912 569 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AC103792.1-201ENST00000603591 919 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AC138473.1-201ENST00000605717 526 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AL135786.2-201ENST00000608422 615 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AL592494.3-201ENST00000609485 464 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 AC015922.4-201ENST00000612568 690 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 AL161637.1-201ENST00000622380 412 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 AC091932.2-201ENST00000623014 291 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 MIR6830-201ENST00000636015 70 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 AC027228.2-201ENST00000567141 2154 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFBP01127 AC104964.3-201ENST00000606115 2860 ntBASIC5.33□□□□□ -1.56
PDGFBP01127 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDGFBP01127 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDGFBP01127 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 MFSD8-220ENST00000641243 1422 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 HSPD1P8-201ENST00000400121 1658 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFBP01127 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFBP01127 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDGFBP01127 U3.22-201ENST00000391120 215 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFBP01127 AC002524.1-201ENST00000411687 547 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.32□□□□□ -1.56
PDGFBP01127 MTND4LP13-201ENST00000425022 298 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.32□□□□□ -1.56
PDGFBP01127 RPS4XP16-201ENST00000427198 791 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AC073143.1-201ENST00000436316 395 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 RSU1P1-201ENST00000453416 441 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 HSPE1P22-201ENST00000456856 327 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.32□□□□□ -1.56
PDGFBP01127 TRBV5-2-201ENST00000489095 273 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 OR9N1P-201ENST00000491296 333 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFBP01127 RN7SKP122-201ENST00000515923 296 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.32□□□□□ -1.56
PDGFBP01127 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDGFBP01127 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFBP01127 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFBP01127 MIR4277-201ENST00000578298 84 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.32□□□□□ -1.56
PDGFBP01127 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFBP01127 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 AC010857.1-201ENST00000606398 594 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 Z95327.3-201ENST00000610385 572 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms