Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 TUBB8P6-201ENST00000436895 1288 ntBASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 KRT8P9-201ENST00000558927 1449 ntBASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SSX2IPQ9Y2D8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 AL049597.2-201ENST00000565575 961 ntBASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 DGCR10-201ENST00000609839 495 ntBASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.99■□□□□ 0.95
SSX2IPQ9Y2D8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 AC005521.1-201ENST00000393351 872 ntBASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 KRT18P16-201ENST00000510337 1294 ntBASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 AC131212.4-201ENST00000623606 975 ntBASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX2IPQ9Y2D8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 AL137013.1-201ENST00000432946 1228 ntBASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SSX2IPQ9Y2D8 AC092720.2-201ENST00000602388 1665 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 AC018553.1-201ENST00000616682 1458 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 AL390955.1-201ENST00000428694 934 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 C2orf69P3-201ENST00000565542 1120 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 AL445228.2-201ENST00000605589 952 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 AC010947.1-201ENST00000623454 693 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 AF106564.1-201ENST00000607058 2553 ntBASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms