Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 AC063952.2-201ENST00000498792 1227 ntBASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 AC091076.1-201ENST00000610741 619 ntBASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 FAM87A-204ENST00000613235 858 ntBASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 AC022616.7-201ENST00000525383 220 ntBASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 AC130371.2-201ENST00000619443 611 ntBASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC46A1Q96NT5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 INGX-201ENST00000359239 846 ntBASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 UPK3BP1-201ENST00000428678 509 ntBASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 YBX1P10-201ENST00000444752 975 ntBASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 AL358472.4-201ENST00000633140 710 ntBASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 TFP1-202ENST00000475455 1573 ntBASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 AC116351.2-201ENST00000606540 1585 ntBASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC46A1Q96NT5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 TUBB8P6-201ENST00000436895 1288 ntBASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 KRT18P16-201ENST00000510337 1294 ntBASIC18.67■□□□□ 0.58
SLC46A1Q96NT5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms