Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Gm6139-201ENSMUST00000079261 882 ntBASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.36■□□□□ 0.05
Smco1Q8CEZ1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco1Q8CEZ1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Gm13234-201ENSMUST00000120010 747 ntBASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco1Q8CEZ1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smco1Q8CEZ1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Smco1Q8CEZ1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smco1Q8CEZ1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smco1Q8CEZ1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Gm6420-201ENSMUST00000193885 723 ntBASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms