Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ppp4r4Q8C0Y0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ppp4r4Q8C0Y0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ppp4r4Q8C0Y0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Ppp4r4Q8C0Y0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm7889-201ENSMUST00000185591 958 ntBASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ppp4r4Q8C0Y0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ppp4r4Q8C0Y0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm8969-201ENSMUST00000199694 526 ntBASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm9987-201ENSMUST00000069768 567 ntBASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ppp4r4Q8C0Y0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ppp4r4Q8C0Y0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ppp4r4Q8C0Y0 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.92■□□□□ 0.3
Ppp4r4Q8C0Y0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms