Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Gm13836-201ENSMUST00000121159 501 ntBASIC16.53■□□□□ 0.24
Ubp1Q811S7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Gm10231-201ENSMUST00000181584 441 ntBASIC16.53■□□□□ 0.24
Ubp1Q811S7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Gm10175-202ENSMUST00000208752 441 ntBASIC16.53■□□□□ 0.24
Ubp1Q811S7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubp1Q811S7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.52■□□□□ 0.24
Ubp1Q811S7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Gm7213-201ENSMUST00000215977 950 ntBASIC16.52■□□□□ 0.24
Ubp1Q811S7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubp1Q811S7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ubp1Q811S7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.52■□□□□ 0.23
Ubp1Q811S7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubp1Q811S7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.52■□□□□ 0.23
Ubp1Q811S7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.52■□□□□ 0.23
Ubp1Q811S7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ubp1Q811S7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubp1Q811S7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Ubp1Q811S7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.51■□□□□ 0.23
Ubp1Q811S7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.51■□□□□ 0.23
Ubp1Q811S7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubp1Q811S7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.5■□□□□ 0.23
Ubp1Q811S7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.5■□□□□ 0.23
Ubp1Q811S7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubp1Q811S7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.49■□□□□ 0.23
Ubp1Q811S7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.49■□□□□ 0.23
Ubp1Q811S7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubp1Q811S7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms