Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rnf220Q6PDX6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rnf220Q6PDX6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Gm7514-201ENSMUST00000209475 934 ntBASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf220Q6PDX6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf220Q6PDX6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms