Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Snx27Q3UHD6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Snx27Q3UHD6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snx27Q3UHD6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Snx27Q3UHD6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.08■□□□□ 0.48
Snx27Q3UHD6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx27Q3UHD6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Snx27Q3UHD6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Gm7153-201ENSMUST00000117092 455 ntBASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx27Q3UHD6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Snx27Q3UHD6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms