Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 NME1-207ENST00000480143 964 ntTSL 2 BASIC30.58■■■□□ 2.49
PCF11O94913 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC30.58■■■□□ 2.49
PCF11O94913 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC30.58■■■□□ 2.49
PCF11O94913 AL137060.1-201ENST00000618151 2648 ntBASIC30.58■■■□□ 2.49
PCF11O94913 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCF11O94913 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC30.58■■■□□ 2.49
PCF11O94913 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
PCF11O94913 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCF11O94913 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
PCF11O94913 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC30.58■■■□□ 2.49
PCF11O94913 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC30.58■■■□□ 2.49
PCF11O94913 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCF11O94913 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.58■■■□□ 2.49
PCF11O94913 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCF11O94913 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCF11O94913 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PCF11O94913 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC30.57■■■□□ 2.48
PCF11O94913 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC30.57■■■□□ 2.48
PCF11O94913 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PCF11O94913 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PCF11O94913 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC30.57■■■□□ 2.48
PCF11O94913 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
PCF11O94913 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
PCF11O94913 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.57■■■□□ 2.48
PCF11O94913 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCF11O94913 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC30.56■■■□□ 2.48
PCF11O94913 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCF11O94913 DERL1-203ENST00000419562 918 ntTSL 2 BASIC30.56■■■□□ 2.48
PCF11O94913 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC30.56■■■□□ 2.48
PCF11O94913 AL160286.2-201ENST00000567150 934 ntBASIC30.56■■■□□ 2.48
PCF11O94913 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.56■■■□□ 2.48
PCF11O94913 MYC-208ENST00000641036 567 ntBASIC30.56■■■□□ 2.48
PCF11O94913 AC009237.14-201ENST00000609975 1594 ntBASIC30.56■■■□□ 2.48
PCF11O94913 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.55■■■□□ 2.48
PCF11O94913 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.55■■■□□ 2.48
PCF11O94913 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
PCF11O94913 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC30.55■■■□□ 2.48
PCF11O94913 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC30.55■■■□□ 2.48
PCF11O94913 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC30.55■■■□□ 2.48
PCF11O94913 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC30.55■■■□□ 2.48
PCF11O94913 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
PCF11O94913 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCF11O94913 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC30.54■■■□□ 2.48
PCF11O94913 HMGA1P5-201ENST00000412453 271 ntBASIC30.54■■■□□ 2.48
PCF11O94913 CYGB-204ENST00000589342 815 ntTSL 3 BASIC30.54■■■□□ 2.48
PCF11O94913 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
PCF11O94913 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
PCF11O94913 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.54■■■□□ 2.48
PCF11O94913 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC30.54■■■□□ 2.48
PCF11O94913 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PCF11O94913 AC007663.1-201ENST00000438948 1240 ntBASIC30.54■■■□□ 2.48
PCF11O94913 AC104076.2-201ENST00000448912 469 ntBASIC30.54■■■□□ 2.48
PCF11O94913 AC128688.1-201ENST00000487626 519 ntBASIC30.54■■■□□ 2.48
PCF11O94913 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
PCF11O94913 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC30.53■■■□□ 2.48
PCF11O94913 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
PCF11O94913 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCF11O94913 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCF11O94913 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PCF11O94913 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC30.53■■■□□ 2.48
PCF11O94913 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
PCF11O94913 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC30.53■■■□□ 2.48
PCF11O94913 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
PCF11O94913 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCF11O94913 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC30.53■■■□□ 2.48
PCF11O94913 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
PCF11O94913 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC30.52■■■□□ 2.48
PCF11O94913 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
PCF11O94913 AC099778.1-201ENST00000568593 1911 ntBASIC30.52■■■□□ 2.48
PCF11O94913 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
PCF11O94913 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCF11O94913 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
PCF11O94913 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.52■■■□□ 2.48
PCF11O94913 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.52■■■□□ 2.48
PCF11O94913 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.52■■■□□ 2.48
PCF11O94913 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCF11O94913 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCF11O94913 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
PCF11O94913 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.48
PCF11O94913 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCF11O94913 AC026396.1-201ENST00000419388 421 ntBASIC30.51■■■□□ 2.47
PCF11O94913 AC117947.1-201ENST00000427448 529 ntBASIC30.51■■■□□ 2.47
PCF11O94913 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCF11O94913 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC30.51■■■□□ 2.47
PCF11O94913 AC130371.2-201ENST00000619443 611 ntBASIC30.51■■■□□ 2.47
PCF11O94913 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC30.51■■■□□ 2.47
PCF11O94913 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms