Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbc1A0A0A6YWV4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm18958-201ENSMUST00000174258 762 ntBASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbc1A0A0A6YWV4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm7370-201ENSMUST00000219471 767 ntBASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms