Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 USP9YP32-201ENST00000452432 430 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC002553.3-201ENST00000453002 341 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL389915.2-201ENST00000454576 441 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC008620.1-201ENST00000468453 592 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC126615.1-201ENST00000470084 630 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC021678.3-201ENST00000517893 476 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR5AZ1P-201ENST00000527448 943 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR4C2P-201ENST00000530855 1064 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 HSPE1P2-201ENST00000554777 306 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC069366.1-201ENST00000583159 838 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 BMS1P7-201ENST00000602440 1052 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC005252.1-201ENST00000604518 1063 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC008966.2-201ENST00000606157 453 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR10AE1P-201ENST00000606962 1029 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 MIR486-1-201ENST00000612171 68 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC012414.7-202ENST00000622705 1090 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC000123.2-201ENST00000623124 461 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 MIR6511B2-201ENST00000636908 71 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR5AC4P-202ENST00000642086 985 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 HCCAT5-202ENST00000642127 1029 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC010928.1-201ENST00000592477 1447 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PHKBP1-201ENST00000450951 1951 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC233968.1-201ENST00000611212 1300 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AL929601.4-201ENST00000613011 1341 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AP000756.2-201ENST00000624168 2567 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AL159987.1-201ENST00000347911 293 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 SNORA21-201ENST00000362423 132 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SKP160-201ENST00000363804 340 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 MIR551A-201ENST00000385042 96 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC104297.1-201ENST00000393779 870 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 OR8V1P-201ENST00000395193 873 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SKP59-201ENST00000410520 314 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC009237.9-201ENST00000414800 347 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 VN1R53P-201ENST00000429536 957 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 PUDPP2-201ENST00000431423 643 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AL356535.1-201ENST00000440335 398 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC073052.1-201ENST00000440417 714 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 TXNP5-201ENST00000441043 315 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC009263.1-201ENST00000441193 1239 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RNU7-170P-201ENST00000459303 61 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 AC100832.1-201ENST00000471945 383 ntBASIC2.48□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SL799P-201ENST00000475891 298 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms