Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RN7SKP74-201ENST00000362849 309 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 MIR589-201ENST00000385238 99 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 SNORA11.5-201ENST00000408163 128 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 RNA5SP178-201ENST00000410380 128 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 NAP1L4P2-201ENST00000425958 899 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC104843.2-201ENST00000427666 297 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC144530.1-201ENST00000452862 555 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 MTCYBP14-201ENST00000457471 715 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC108161.1-201ENST00000461060 402 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL423P-201ENST00000486202 304 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 EIF1P7-201ENST00000487533 337 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC022133.1-201ENST00000490961 571 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL466P-201ENST00000497546 295 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC022360.1-201ENST00000521058 340 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 RBM22P1-201ENST00000578589 1214 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC015922.4-201ENST00000612568 690 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC007996.1-201ENST00000620414 2821 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 BX005019.1-201ENST00000561881 1810 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 AC100778.3-201ENST00000580060 1750 ntBASIC4.58□□□□□ -1.68
RHBDD3Q9Y3P4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 RNA5SP335-201ENST00000363817 110 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SKP15-201ENST00000364742 309 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AL391422.1-201ENST00000402155 436 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AL512430.2-201ENST00000406786 339 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SKP293-201ENST00000411389 296 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 PCNPP2-201ENST00000441651 455 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC017007.3-201ENST00000479865 435 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AP006245.2-201ENST00000522004 300 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 YWHABP2-201ENST00000540201 713 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC020978.7-201ENST00000575953 1187 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AL162431.4-201ENST00000604674 411 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC026124.2-201ENST00000621847 656 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 MIR8080-201ENST00000622224 89 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC090971.4-201ENST00000560291 1800 ntBASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RHBDD3Q9Y3P4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC005294.1-201ENST00000355509 281 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SKP153-201ENST00000365026 316 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 RNU1-77P-201ENST00000390868 162 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SNORA17A-201ENST00000391185 133 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 PCNPP4-201ENST00000414817 517 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC022022.1-201ENST00000430304 178 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 MTND6P18-201ENST00000439477 513 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 FHP1-201ENST00000442741 703 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms