Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MTCO1P7-201ENST00000419523 1542 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC073429.2-201ENST00000569694 1444 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP455-201ENST00000365190 119 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP187-201ENST00000384400 119 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AL589994.1-201ENST00000404962 340 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 CBX1P3-201ENST00000413296 527 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RPS27AP6-201ENST00000427962 448 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 HSPD1P12-201ENST00000429127 1069 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 MTND2P40-201ENST00000436718 841 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RPL34P20-201ENST00000442771 351 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 RPL35AP28-201ENST00000459730 331 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC020779.1-201ENST00000478757 796 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 DEFB109A-201ENST00000482450 265 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AL133372.1-201ENST00000493565 745 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AP000926.3-201ENST00000497201 299 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 MORF4L2P1-201ENST00000503761 858 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 COX6B1P5-201ENST00000509843 249 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC021193.1-201ENST00000511607 420 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC027216.1-201ENST00000577726 685 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 Mico1.1-201ENST00000611698 204 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 EIF3FP1-201ENST00000613970 806 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC241377.1-201ENST00000619797 406 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AL445528.2-201ENST00000620582 470 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC091905.4-201ENST00000623432 202 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AC112694.2-201ENST00000623697 768 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 AL353662.3-201ENST00000625131 237 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP123-201ENST00000363244 119 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP223-201ENST00000365174 120 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 PA2G4P6-201ENST00000438325 1197 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 MTND4LP12-201ENST00000448237 295 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 FTH1P11-201ENST00000517577 551 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 OR7E128P-201ENST00000532736 1024 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 MTND2P17-201ENST00000550281 688 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 SNORA35B-201ENST00000607417 129 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 Z95327.3-201ENST00000610385 572 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms