Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 EIF3EP1-201ENST00000433978 1316 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 TVP23CP1-201ENST00000450317 639 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 TATDN2P3-201ENST00000452855 3665 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 RANP1-206ENST00000455094 651 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 UBTFL6-201ENST00000477929 1024 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 GUSBP9-201ENST00000510138 584 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 BTG4P1-201ENST00000510421 183 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 Y_RNA.702-201ENST00000516843 96 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 EIF5A2P1-201ENST00000564027 460 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC004805.3-201ENST00000603178 310 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 BNIP3P4-201ENST00000604946 565 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 TUG1_1.1-201ENST00000610654 145 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 AL445670.1-201ENST00000618889 801 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC012414.7-202ENST00000622705 1090 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 OR5H6-203ENST00000642105 978 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 UG0898H09-202ENST00000623646 7040 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC137056.2-201ENST00000624055 1958 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC007485.2-201ENST00000623493 1667 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 KYNUP3-201ENST00000574386 1341 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 RN7SKP250-201ENST00000363924 321 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 RNU1-84P-201ENST00000365447 164 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 RNU6-348P-201ENST00000384386 107 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 RN7SKP129-201ENST00000410288 299 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 Z97055.1-201ENST00000419730 712 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL139158.1-201ENST00000424719 340 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 PMS2P9-201ENST00000441237 515 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC234771.2-201ENST00000445718 597 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 MTND3P10-201ENST00000450967 341 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC098583.1-201ENST00000480875 255 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC041039.1-201ENST00000485656 536 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 RPL29P23-201ENST00000486188 442 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC117522.1-201ENST00000509821 380 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC025260.1-201ENST00000548858 430 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL162632.2-201ENST00000553933 399 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MT1CP-201ENST00000567054 174 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL390838.2-201ENST00000602394 274 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 CYCSP1-201ENST00000604815 315 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AL589743.6-201ENST00000611025 117 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 SNX18P10-201ENST00000625014 519 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms