Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 OR7E125P-201ENST00000443450 846 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC010733.1-201ENST00000451515 401 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC127024.5-201ENST00000580085 462 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 uc_338.18-201ENST00000615451 175 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AP000648.2-201ENST00000624182 404 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC125336.1-201ENST00000508893 2827 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 RN7SKP103-201ENST00000363848 320 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 SNORA2.3-201ENST00000383920 135 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 RPS3AP53-201ENST00000454716 778 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC100784.1-201ENST00000522790 310 ntBASIC4.79□□□□□ -1.64
CCDC88CQ9P219 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC88CQ9P219 INTS6P1-201ENST00000504674 2530 ntBASIC4.78□□□□□ -1.64
CCDC88CQ9P219 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AC013442.1-201ENST00000397347 228 ntBASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AL645733.1-201ENST00000402250 217 ntBASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AL354714.3-201ENST00000447284 493 ntBASIC4.78□□□□□ -1.64
CCDC88CQ9P219 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 RPS4XP20-201ENST00000505751 772 ntBASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 AC010266.2-201ENST00000564741 3255 ntBASIC4.78□□□□□ -1.64
CCDC88CQ9P219 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC88CQ9P219 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC104333.2-201ENST00000422630 192 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 BX323845.1-201ENST00000432417 179 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL157385.1-201ENST00000446973 268 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 TCEA1P1-201ENST00000449716 880 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 HMGB1P4-201ENST00000455362 567 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 RPL23AP72-201ENST00000492447 435 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL627230.1-201ENST00000613077 211 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL591926.8-201ENST00000616876 211 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 MIR7641-1-201ENST00000627518 61 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms