Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 RN7SKP288-201ENST00000516227 268 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AC138832.1-201ENST00000522871 556 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LRRC6P1-201ENST00000532188 885 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AP002373.2-201ENST00000541631 1060 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 NPM1P47-201ENST00000560843 856 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 ATP5F1P7-201ENST00000567330 760 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 RPP40P2-201ENST00000603596 712 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AL078595.3-201ENST00000623815 1166 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 AC007342.5-201ENST00000571340 2142 ntBASIC5.56□□□□□ -1.52
NECTIN3Q9NQS3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 RNU1-150P-201ENST00000362491 162 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 HMGN1P20-201ENST00000411849 300 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 TCEA1P4-201ENST00000415066 844 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 IPPKP1-201ENST00000422501 768 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 OSTCP5-201ENST00000425293 453 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 FTLP19-201ENST00000433300 394 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AL663074.2-201ENST00000440621 479 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC144530.1-201ENST00000452862 555 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 RSU1P1-201ENST00000453416 441 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 RPL12P24-201ENST00000474907 486 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 RPS12P31-201ENST00000491419 398 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC023050.1-201ENST00000498198 304 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 RNA5SP271-201ENST00000516700 88 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 MORF4L1P3-201ENST00000525966 950 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC079064.1-201ENST00000528365 362 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AP004609.2-201ENST00000532177 190 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC125612.1-201ENST00000547580 377 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC006530.1-201ENST00000555980 571 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AL356801.1-201ENST00000559320 294 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC027104.1-201ENST00000563702 681 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC092121.1-201ENST00000569452 202 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 TXNP4-201ENST00000575018 310 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC010503.3-201ENST00000594355 540 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC005377.1-201ENST00000605126 456 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC112220.2-201ENST00000605513 533 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC015982.1-201ENST00000608113 465 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 FRG1HP-204ENST00000617940 757 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AC006927.4-201ENST00000639187 543 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 AL161756.3-201ENST00000641216 2071 ntBASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NECTIN3Q9NQS3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms