Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 RNU6-374P-201ENST00000364146 108 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 RNU6-1011P-201ENST00000384668 107 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 NCSTNP1-201ENST00000406229 144 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 RWDD4P2-201ENST00000426392 563 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 MTCO3P18-201ENST00000440206 761 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 NFU1P2-201ENST00000448700 469 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC098824.1-201ENST00000453565 980 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 MED28P7-201ENST00000456611 530 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC146507.1-201ENST00000468335 354 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 RN7SL654P-201ENST00000479178 292 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 RPL7AP23-201ENST00000482625 776 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL358832.1-201ENST00000497800 389 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 ARL2BPP6-201ENST00000512757 439 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 RN7SKP31-201ENST00000516354 278 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 SSU72P6-201ENST00000532644 488 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 RAB11AP2-201ENST00000545905 639 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 EIF5A2P1-201ENST00000564027 460 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 SYPL1P2-201ENST00000582878 727 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 MIR4420-201ENST00000583944 77 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC007038.2-201ENST00000608095 740 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC005962.2-201ENST00000611427 652 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC024255.1-201ENST00000614376 102 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC104260.1-201ENST00000616660 539 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 STMN1P1-201ENST00000617809 440 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC106782.7-201ENST00000624024 418 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 CR381653.2-201ENST00000624041 768 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC133555.5-201ENST00000624430 418 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC026108.1-201ENST00000635444 547 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC007998.4-201ENST00000612496 2533 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC092692.1-201ENST00000623625 2595 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
SSU72Q9NP77 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
SSU72Q9NP77 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
SSU72Q9NP77 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 RNU6-181P-201ENST00000363225 107 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 Y_RNA.302-201ENST00000364997 102 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 RNU4-12P-201ENST00000365233 139 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AL034403.1-201ENST00000399414 885 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 RPL23AP17-201ENST00000401064 499 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 RNA5SP280-201ENST00000411230 115 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 GLRXP1-201ENST00000423261 334 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AL590128.1-201ENST00000433407 286 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 BX679664.2-201ENST00000439282 283 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 DNAJC19P5-201ENST00000443295 316 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms