Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC010615.3-201ENST00000597319 394 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AL121890.2-201ENST00000617644 465 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 BX005214.3-202ENST00000619809 325 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 SAMMSON-227ENST00000642114 1199 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC235565.1-201ENST00000456962 1325 ntBASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRC40Q9H9A6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRRC40Q9H9A6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LRRC40Q9H9A6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRRC40Q9H9A6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 HSPA8P17-201ENST00000427029 1382 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 RN7SKP113-201ENST00000363891 295 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 MIR600-201ENST00000385007 98 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 U3.25-201ENST00000391209 220 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 RPL5P19-201ENST00000404228 893 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 GAPDHP34-201ENST00000432112 823 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 CFL1P1-202ENST00000432948 411 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 OR2AO1P-201ENST00000476497 403 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC069304.1-201ENST00000491593 704 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 IGLVIV-64-201ENST00000518581 301 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 HNRNPRP2-201ENST00000528421 743 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC068993.1-201ENST00000546724 589 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC127381.1-201ENST00000555979 939 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 MIR4310-201ENST00000582950 57 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC063976.2-201ENST00000425667 3556 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 AC027228.2-201ENST00000567141 2154 ntBASIC5.21□□□□□ -1.58
LRRC40Q9H9A6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 U3.32-201ENST00000408116 212 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 NPM1P4-201ENST00000414095 812 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 CHEK2P5-201ENST00000423877 246 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AL391987.1-201ENST00000441025 200 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC004980.3-201ENST00000447046 365 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC011225.1-201ENST00000457751 369 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 RPL5P22-201ENST00000480199 884 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 PGAM1P13-201ENST00000507497 754 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 RNU6-513P-201ENST00000516104 104 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 IGKV2-18-201ENST00000522607 343 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC124856.1-201ENST00000600819 896 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AP005432.2-201ENST00000608162 586 ntBASIC5.2□□□□□ -1.58
LRRC40Q9H9A6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms