Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC010132.2-201ENST00000295493 1043 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 RNU1-65P-201ENST00000363919 148 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 Y_RNA.192-201ENST00000363977 102 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 Y_RNA.516-201ENST00000384541 124 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL391419.1-201ENST00000398901 1275 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 OR2W4P-201ENST00000406496 926 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MIR1275-201ENST00000408770 80 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 RNU6-757P-201ENST00000410334 100 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MRPS21P5-201ENST00000417885 231 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 EMC3-AS1-205ENST00000438698 534 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 GAPDHP33-201ENST00000443168 1013 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 DNAJC19P5-201ENST00000443295 316 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC097359.1-201ENST00000447946 463 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL358876.1-201ENST00000453364 1075 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 RPS20P4-201ENST00000461659 355 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC011979.1-201ENST00000472300 483 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 RN7SL170P-201ENST00000487098 295 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC112198.1-201ENST00000505369 1220 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AP000873.5-201ENST00000533906 236 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC009120.3-201ENST00000563335 499 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MIR3154-201ENST00000577829 84 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MTCO2P22-201ENST00000603246 681 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AL139418.1-201ENST00000613613 177 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 ZNF663P-202ENST00000641770 1131 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 SAGE3P-201ENST00000619800 1635 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 RNA5SP140-201ENST00000364524 92 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AL591503.2-201ENST00000442314 1005 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 GTF3AP5-201ENST00000442645 697 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 RPL5P10-201ENST00000445207 894 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AC092967.1-201ENST00000449016 481 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AC104849.1-201ENST00000462623 405 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AC025459.1-201ENST00000504072 156 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 MTATP6P22-201ENST00000507369 598 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 CBX3P3-201ENST00000508108 532 ntBASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXP3Q9BZS1 AC091965.2-201ENST00000512324 613 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms