Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AL357515.1-201ENST00000402967 542 ntBASIC8.11□□□□□ -1.11
IFT140Q96RY7 OR51B3P-201ENST00000412287 913 ntBASIC8.11□□□□□ -1.11
IFT140Q96RY7 RPL34P6-201ENST00000432390 345 ntBASIC8.11□□□□□ -1.11
IFT140Q96RY7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AC011477.5-201ENST00000586571 259 ntBASIC8.11□□□□□ -1.11
IFT140Q96RY7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 AC025574.1-201ENST00000554784 1653 ntBASIC8.11□□□□□ -1.11
IFT140Q96RY7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.11□□□□□ -1.11
IFT140Q96RY7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
IFT140Q96RY7 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
IFT140Q96RY7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
IFT140Q96RY7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 AC097523.2-201ENST00000435551 652 ntBASIC8.1□□□□□ -1.11
IFT140Q96RY7 RNA5SP143-201ENST00000516936 115 ntBASIC8.1□□□□□ -1.11
IFT140Q96RY7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
IFT140Q96RY7 AC090948.2-201ENST00000607363 564 ntBASIC8.1□□□□□ -1.11
IFT140Q96RY7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 AC023043.4-201ENST00000612081 449 ntBASIC8.1□□□□□ -1.11
IFT140Q96RY7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
IFT140Q96RY7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
IFT140Q96RY7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
IFT140Q96RY7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
IFT140Q96RY7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC009779.8-201ENST00000641684 4384 ntBASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC002525.1-201ENST00000624392 1622 ntBASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 PHBP16-201ENST00000446318 950 ntBASIC8.09□□□□□ -1.11
IFT140Q96RY7 BX842559.2-201ENST00000451418 605 ntBASIC8.09□□□□□ -1.11
IFT140Q96RY7 TAAR4P-201ENST00000454843 1039 ntBASIC8.09□□□□□ -1.11
IFT140Q96RY7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 SNORA67.7-201ENST00000516664 135 ntBASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
IFT140Q96RY7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
IFT140Q96RY7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
IFT140Q96RY7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
IFT140Q96RY7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
IFT140Q96RY7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC8.09□□□□□ -1.12
IFT140Q96RY7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
IFT140Q96RY7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
IFT140Q96RY7 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
IFT140Q96RY7 AC092681.1-201ENST00000297369 291 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 RNA5SP317-201ENST00000410176 116 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 RNA5SP311-201ENST00000411290 116 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 CEACAMP8-201ENST00000413902 580 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 YWHAZP2-201ENST00000440317 728 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 RNA5SP315-201ENST00000516340 116 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 RNA5SP312-201ENST00000517068 116 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 AC067931.1-201ENST00000624190 671 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 PRNCR1-201ENST00000635449 12727 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
IFT140Q96RY7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
IFT140Q96RY7 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.08□□□□□ -1.12
IFT140Q96RY7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
IFT140Q96RY7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
IFT140Q96RY7 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.08□□□□□ -1.12
IFT140Q96RY7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 AL450023.3-201ENST00000440592 271 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 AL691482.1-201ENST00000453255 87 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 MTND4LP2-201ENST00000502312 285 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms