Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC000111.2-201ENST00000448200 210 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 RPS5P7-201ENST00000456664 608 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 OR2A3P-201ENST00000493774 953 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 snoU109.5-201ENST00000516231 132 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 CDRT1-208ENST00000630868 794 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC063976.2-201ENST00000425667 3556 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 RN7SKP177-201ENST00000410567 355 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AL161722.2-201ENST00000434731 981 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 LINC02210-201ENST00000444561 288 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 RPL7P15-201ENST00000461190 712 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC079804.1-201ENST00000461922 436 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC010632.3-201ENST00000611377 369 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 RPS3AP12-201ENST00000443616 753 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 RPL36AP41-201ENST00000493820 306 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC136777.2-201ENST00000522979 358 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 MIR589-201ENST00000385238 99 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC018644.1-201ENST00000429934 551 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 RN7SL810P-201ENST00000493031 276 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AL049839.1-201ENST00000556151 657 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 RN7SL435P-201ENST00000584418 282 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC069542.2-201ENST00000624816 216 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 TPT1P2-201ENST00000413105 503 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.06□□□□□ -1.76
CSMD1Q96PZ7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AL691482.1-201ENST00000453255 87 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AP001804.1-201ENST00000526868 919 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AC007179.3-201ENST00000604976 235 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 BX005214.3-202ENST00000619809 325 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms