Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AC015802.2-201ENST00000589690 189 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AC006115.2-201ENST00000596823 202 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AL021707.7-201ENST00000607991 416 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AL135999.3-201ENST00000610501 812 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AC008121.2-201ENST00000614647 523 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AC015712.7-201ENST00000615211 635 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AL031658.2-201ENST00000616850 651 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 CASC19-222ENST00000641321 1173 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AL356317.1-201ENST00000396110 1436 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 AC010168.2-201ENST00000562691 5428 ntBASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.74□□□□□ -1.33
CHAMP1Q96JM3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC008627.1-201ENST00000517511 1704 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL354854.1-201ENST00000455940 1363 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 YWHAZP6-201ENST00000399764 738 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 XKRYP4-201ENST00000414395 483 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 EIF4A1P1-201ENST00000420241 934 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 NIPA2P1-201ENST00000426223 976 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL365396.1-201ENST00000430854 671 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL445928.1-201ENST00000435545 222 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC096775.1-201ENST00000437724 448 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL353662.1-201ENST00000439099 327 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 XKRYP5-201ENST00000449659 483 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL133217.1-201ENST00000450980 425 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 PPIAP7-201ENST00000454070 489 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 PDCL3P4-201ENST00000489621 720 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC034244.1-201ENST00000507687 207 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 SNORA3.4-201ENST00000515969 96 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 SNORA74.1-201ENST00000516320 180 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AP006245.2-201ENST00000522004 300 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC010306.1-201ENST00000523223 1117 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AP000620.1-201ENST00000527147 504 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC093524.1-201ENST00000564266 1094 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 MIR4789-201ENST00000577469 82 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AP005119.1-201ENST00000580956 292 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC069366.1-201ENST00000583159 838 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC007349.4-201ENST00000608114 532 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AP000676.3-201ENST00000623299 569 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AL390318.1-201ENST00000624564 687 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC073488.3-201ENST00000631611 778 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC018809.2-201ENST00000602436 3823 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 AC104966.1-201ENST00000467010 1464 ntBASIC6.73□□□□□ -1.33
CHAMP1Q96JM3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 CDY11P-201ENST00000447168 1651 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 RN7SKP185-201ENST00000362813 326 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 RNU6-236P-201ENST00000363886 106 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 Y_RNA.472-201ENST00000384322 102 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 MIR188-201ENST00000385034 86 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 SFR1P1-201ENST00000403720 688 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 AC096921.1-201ENST00000411661 375 ntBASIC6.72□□□□□ -1.33
CHAMP1Q96JM3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms