Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 HLA-DPA3-207ENST00000454398 229 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS50Q96JG6 RPL5P13-201ENST00000462840 709 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC007998.1-201ENST00000474156 672 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC023424.1-201ENST00000496058 459 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 CCDC11P1-201ENST00000503137 1162 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 Y_RNA.667-201ENST00000516212 107 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 MIR4776-2-201ENST00000580204 80 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC009974.1-201ENST00000608881 455 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AL157392.4-201ENST00000609756 345 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 VN1R9P-201ENST00000614184 867 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC105105.5-201ENST00000622635 1294 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC006840.1-201ENST00000623069 542 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 SNORA17.5-201ENST00000630429 132 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS50Q96JG6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS50Q96JG6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS50Q96JG6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
VPS50Q96JG6 AC092376.2-201ENST00000622621 4116 ntBASIC5.65□□□□□ -1.51
VPS50Q96JG6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS50Q96JG6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS50Q96JG6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.65□□□□□ -1.51
VPS50Q96JG6 MTND5P11-201ENST00000511037 1812 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC234772.1-201ENST00000377927 937 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 PCNPP4-201ENST00000414817 517 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 FABP5P3-201ENST00000437960 408 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC018638.3-201ENST00000461273 132 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC107015.1-201ENST00000466902 747 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC079080.1-201ENST00000479841 822 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 RPL21P47-201ENST00000483696 477 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 PPIAP19-201ENST00000486414 492 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC005412.2-201ENST00000492004 341 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 PSMA2P2-201ENST00000504319 686 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 RNU6-513P-201ENST00000516104 104 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 RNU6-276P-201ENST00000516114 96 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AP001207.2-201ENST00000519490 539 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 LRRC34P1-201ENST00000542742 915 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC090888.2-201ENST00000559765 1144 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC106734.1-201ENST00000568646 663 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC012146.2-201ENST00000576545 416 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC084373.1-201ENST00000603311 235 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 FAM27E4-201ENST00000605259 342 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC127024.6-201ENST00000621598 424 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC006963.1-201ENST00000624003 1052 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 SEPT7P7-201ENST00000420492 1301 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AL031595.2-201ENST00000624215 19071 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms