Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC025857.2-201ENST00000602711 238 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC069431.2-201ENST00000604149 1099 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AL512427.1-201ENST00000618593 349 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC074140.1-201ENST00000621617 208 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AP001962.1-201ENST00000624114 559 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC005618.4-201ENST00000625053 554 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 ABCC13-202ENST00000463099 3842 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC087516.1-201ENST00000561236 2428 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC114786.1-201ENST00000512892 1415 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 MTND5P11-201ENST00000511037 1812 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC092681.1-201ENST00000297369 291 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 RNU4-7P-201ENST00000364758 141 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 RN7SKP28-201ENST00000364770 305 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 RNA5SP131-201ENST00000365452 119 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 RPS3AP25-201ENST00000411660 793 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 VN1R51P-201ENST00000411675 945 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 RPS26P13-201ENST00000419030 330 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 TCEA1P2-201ENST00000420496 906 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL662874.1-201ENST00000426065 230 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 FO393414.1-201ENST00000428697 1184 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 MTATP6P17-201ENST00000431030 672 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC093716.1-201ENST00000435923 377 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL450996.1-201ENST00000445574 1202 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 EEF1B2P6-201ENST00000445713 673 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 IGBP1P3-201ENST00000447449 1000 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 PSAT1P4-201ENST00000466500 526 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 CBX1P5-201ENST00000475330 559 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC096571.1-202ENST00000506634 735 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 SUMO2P5-201ENST00000506790 245 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 SNORA70.11-201ENST00000515987 138 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 SNORA70.13-201ENST00000516116 138 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 RN7SKP253-201ENST00000516424 309 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC112191.2-201ENST00000522428 333 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC021451.1-201ENST00000523498 1129 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 CIR1P1-201ENST00000524055 1133 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC104229.1-201ENST00000561364 255 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC122134.1-201ENST00000565664 1104 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC023825.1-201ENST00000566704 1030 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC124283.4-201ENST00000581815 456 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC013244.3-201ENST00000605614 388 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC068787.1-201ENST00000623908 691 ntBASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP3Q96JB5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CDK5RAP3Q96JB5 AC008432.1-201ENST00000615912 1320 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 KARSP1-201ENST00000451871 1752 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AL355488.2-201ENST00000609909 2850 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms