Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 MTCO3P5-201ENST00000433620 714 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 MTCYBP12-201ENST00000440559 1134 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AL512605.1-202ENST00000441919 381 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AP000281.1-201ENST00000444036 316 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AL359955.2-201ENST00000445380 353 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 MTND6P5-201ENST00000448266 512 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 RPS27AP3-201ENST00000453803 454 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 MTND2P28-201ENST00000457540 1044 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 SNX18P26-201ENST00000458433 740 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 RAP1BP2-201ENST00000478270 544 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 RN7SL717P-201ENST00000478343 297 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC011037.1-201ENST00000483964 558 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 RPL7L1P4-201ENST00000513004 707 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC092593.2-201ENST00000513866 913 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 PCNAP4-201ENST00000532690 730 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC087897.1-201ENST00000550134 156 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC020916.2-201ENST00000591242 360 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC011939.3-201ENST00000613686 466 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC123767.1-202ENST00000620407 817 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 OR11H2-202ENST00000641517 1085 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 MTND4P5-201ENST00000435821 1374 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 DDX43P2-201ENST00000604753 1354 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC015689.2-201ENST00000528172 1738 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 CDY17P-201ENST00000414121 1282 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 XKRYP4-201ENST00000414395 483 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC064862.4-201ENST00000442180 334 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 XKRYP5-201ENST00000449659 483 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL096803.2-201ENST00000450032 677 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 NPM1P19-201ENST00000450070 712 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 CFL1P4-201ENST00000451536 498 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 RPL7P45-201ENST00000455851 743 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC126121.1-201ENST00000482313 553 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 RPS3AP22-201ENST00000488297 769 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 RPS27AP16-201ENST00000492222 470 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC074087.1-201ENST00000512059 724 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AP003717.3-201ENST00000544832 1180 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 ZNF322P1-201ENST00000568013 1209 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 MIR4789-201ENST00000577469 82 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms