Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ERCC4Q92889 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC4Q92889 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 HSPD1P11-201ENST00000508643 1702 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 SNORA51.9-201ENST00000384295 124 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 VN1R12P-201ENST00000403778 876 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 RNU2-17P-201ENST00000410290 190 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AL449283.1-202ENST00000418249 604 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 MORF4L1P6-201ENST00000418771 268 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AC015983.1-201ENST00000441577 373 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 TRIM60P16-201ENST00000444048 694 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 Z95152.1-201ENST00000453556 656 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC008280.2-201ENST00000455473 307 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC010468.1-201ENST00000461022 817 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 RPL6P9-201ENST00000466502 859 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 RPSAP39-201ENST00000467439 883 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC091874.2-201ENST00000505889 720 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 RFPL4AP3-201ENST00000515267 345 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AL442163.2-201ENST00000553912 710 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 MTCYBP28-201ENST00000566728 1132 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC4Q92889 VN1R78P-201ENST00000597393 564 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AC015726.1-201ENST00000602353 681 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC025165.5-201ENST00000602802 578 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 AC245008.1-201ENST00000608123 476 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC4Q92889 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AL035661.1-201ENST00000620459 1144 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 DDX18P6-201ENST00000450119 1997 ntBASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ERCC4Q92889 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC4Q92889 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC4Q92889 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC092111.2-201ENST00000611627 1414 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ERCC4Q92889 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 OR56A4-201ENST00000330728 1209 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 RNA5SP326-201ENST00000363209 110 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 RNU5B-1-201ENST00000363286 116 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 HMGB1P10-201ENST00000395823 563 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 EI24P3-201ENST00000399046 1062 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 SNORA11.5-201ENST00000408163 128 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 EIF4A1P1-201ENST00000420241 934 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms